Amphiprion ocellaris (clown anemonefish): 111572751
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Entry
111572751 CDS
T06018
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04514
Cell adhesion molecule (CAM) interaction
aoce04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111572751 (lrrc4ba)
04517 IgSF CAM signaling
111572751 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111572751 (lrrc4ba)
Cell adhesion molecules [BR:
aoce04515
]
Immunoglobulin superfamily
NGL family
111572751 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
LRR_NXF1-5
Pam3_Gp34
Motif
Other DBs
NCBI-GeneID:
111572751
NCBI-ProteinID:
XP_023132322
Ensembl:
ENSAOCG00000018010
UniProt:
A0A3Q1BGD5
LinkDB
All DBs
Position
19
Genome browser
AA seq
733 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETGGGNDYALVAINETFIHVRPGP
TPSDLWTDIVPTTDSSLSPSWSSSSPHTTRPTFTVPITMPGFSGLDDVMKTTKIIIGCFV
AITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVTQ
SGSSGIGGGQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMGLGLGTGPGVGLNNN
NNPSPCSQSQNISCSQVPTSTGGGVPTGGTLPSPVPLPQLGLHSSLKGLMGKGQNEPLLF
KSGSKENVQETQI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagctgctactgcggctcctcctccctgggccggagctagtgggagccgcctcctcctgc
ccctccctgtgcacctgctccaaccaggccagccgagtcatctgcaccaggcaaaacttg
gaggaggtgcccgaaagcatatccgtcaacacgcgatacctcaacctgcaggagaactcg
atacaggtcatcaagtcagacacgttcaagcatttgaggcacctggaaatcctccaactc
tccaagaatcagatacgtcagattgaagttggagcattcaatggcctccccaacctcaac
acactggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctgcgggagctgtggctgcgcaacaaccccattgagactctgcccggctatgcc
ttccaccgtgtgccctcgctacgtcgcctggacctgggtgagctcaagaagttggatttc
atctctgatgcagcctttgtgggcctcatcaatctgcggtacctgaaccttggcatgtgt
ggactgaaagacattcctaaactgacggccctggtgcgtttggaggagctggagctgtca
ggaaaccggttggagattatccgtccaggctccttccagggcctggtgtcccttcgcaag
ctgtggctaatgcactcacaggtgtccgtcatcgaacgcaacgcatttgatgacctgaaa
aaccttgaagagctcaacctgtcccataattccctgcactccctgccccacgacctcttc
acaccccttcaccagctggagagggttcacctcaaccataacccatgggtctgcaactgt
gatgtactttggcttagttggtggttgaaggagacggtgcccagtaacaccacctgctgt
gcccgctgccacgctccgccattcttaaagggcaaatacattggagagcttgaccagagc
cacttcacctgctatgctcctgtcattgtagagccgcctacagacctgaatgtcaccgag
ggcatggctgctgagctcaagtgtcgcacaagcacgtccacaacatctgtcaactggatc
acccctaatggcactctaatgacccacggctcttaccgggtgaggatatccgtcctgcat
gatggcacactcaacttcacgaatgtcaccctgcgagacacgggccaatacacctgcatg
gtgaccaacgctgctggcaacactacggcgactgctgtccttaacgttactgctgctgat
gccagtgtcaactacacctactttacaacagttactgtggaaacggtggagactggagga
ggtaacgattatgcattggttgccatcaatgagaccttcatccacgttcgccctggccca
actccctccgacctgtggacagacattgttcctaccacagactcctctctgtctcccagc
tggtcctcctcctctccccacaccactcgacccaccttcactgtgccaatcaccatgccg
ggcttctcaggcctggacgatgtgatgaagaccaccaagattatcattggctgcttcgta
gccattaccttcatggcagcggtgatgctggtggtgttctacaagctgaggaagcagcat
cagctgcacaaacaccatggccctgctcgtgccatcgagatcatcaacgtggaggacgag
ctgggcgccggggccagcggtcggggcagcggcatctcaggaggctccacggtgacgcag
agcggaagcagtggaataggaggtggtcagagcctcaggctgcatcacccagagatagtc
aacctgcccaatctggcccggtcggagcacctcaaccactactacaaaacccatcacttc
aacaacaacatgatgggcctgggcctgggcacgggccctggcgtgggcctcaacaacaac
aacaacccctcgccatgctctcagtcacaaaacatatcctgttcccaggttccaacctcc
accggtgggggagtacccacgggtggcaccttgccctcccctgtccccctgccccagttg
ggtctccacagttctctgaaaggcctaatggggaaaggccagaatgagccactacttttt
aagagcggctcaaaggaaaatgtgcaagagactcaaatttga
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