Amphiprion ocellaris (clown anemonefish): 111572761
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Entry
111572761 CDS
T06018
Symbol
rc3h1b
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111572761 (rc3h1b)
04121 Ubiquitin system [BR:
aoce04121
]
111572761 (rc3h1b)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
111572761 (rc3h1b)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111572761 (rc3h1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-CCCH
zf-C3HC4_2
zf-CCCH_4
Prok-RING_4
zf-CCCH_UNK
zf_CCCH_4
FYVE
NS3_helicase_C
Baculo_IE-1
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
111572761
NCBI-ProteinID:
XP_023132336
Ensembl:
ENSAOCG00000019101
UniProt:
A0AAQ5ZWZ3
LinkDB
All DBs
Position
10:complement(16350519..16367436)
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AA seq
1136 aa
AA seq
DB search
MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAISTD
IEQLPVNTALLQLVGGQVPKAQPVALITSPEDSQHYEEARQCVEELALYLKPLSNTRGVG
LSSTAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR
DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARLPGAGGLLSDEGLPLDVAVTRKPS
PLTNGNVAPSLPQLIARGTDTVSYELLRKPVKMDGGNPSAPGSPPDVLDPVPKPGMPLPP
HAMAHPRIAADHLSGVKHMPVVARGSPVYPQPQLPEMCYDTRPPPSASQYEPPQYPTGYP
YQQPPQYVPRDYIRNPPPPGESGPPYQDPYPGYGPPERPYQAPHSGPPFSYPHPPHYDRG
RHGTYAGPPPPPQPYPSQRDGLVRMSPAPLDVPPPSAGQANSLYHQEHSSRDRYPPDAYY
QPGAQPPPMRTYVRGPSYSGSQPSLDYLHRRRQELLSQLEERKVISPPPFAASPTLSHPF
PSDYPPEYGEESSKALVKCREPDYAGQYSPWSCETIGSYIGTKDVKPKDVMVPGTMEMMN
VEAKALREPSLEAPRRGAEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTTGPVQAMAA
TPQNPNSKHMAMPAEYTYGSHGGWGGASYPSHQTASSSQGHFSERLPMAASDREQLKIEL
QQVNQQITQQTQMHSMEAASNSLLLQREASALAGQPVQSSQVQAAVAPQQQQPKWPAGGA
SATAVSSEQLSLELHQVEREIGKRTREMAMENQVAHDVQQYKMKPAENGQPEHKTQLEEI
SLALGEVSNGSSSLQESAVGGSMLSLTNKTSALGLCSDPGATGSEMQKNGVVHSCS
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgcaagcaccacaatggacagagttcctgctgtgcccaatctgcacacagaca
tttgaagagactgttcgccggcccatcagcttgggctgtggacatactgtctgcaagatg
tgcctgaacaagttgcaccgtaaggcctgtccctttgaccagacagccatcagcacagac
atcgagcagctacctgtcaacacagccctgttgcagctcgtgggaggccaggttcctaag
gctcagccagttgctttaataaccagtcctgaggactcacagcattatgaggaagccagg
cagtgtgtggaggaactggccctctacctcaaacccctcagcaacacccggggtgtgggt
ttgagcagtacagcccagagcatgcttagtcgacccatgcagaggaaactggtaactctg
gtccactgccagctggtggaagaagagggccgtgttagagccatgagagctgcccgctct
ctgggtgagcgaactgtcaccgaactcatcttgcagcaccagaatccacagcagctctct
tccaatctgtgggctgctgtccgtgcacgaggatgtcagtttcttggcccagcaatgcaa
gaggaagctctaaagttggttctccttgctctagaggatggttctgctctgtccagaaaa
gttttggttctctttgtagttcagaggcttgaaccacgctttccccaggcctctaaaact
agcataggccatgtggtgcagctcctctacagggcctcctgctttaaggtcaccaaacgt
gatgaagattcatccctgatgcagctgaaagaggagttccgtacttacgaggctctgcga
cgtgagcatgactctcagattgttcagattgccatggagggtggactgcgcattgcacct
gaccagtggtcttctctgttgtatggagatcaatctcacaagtcacacatgcagtctatc
atcgacaagctgcagaccccagcatcttttgctcagagtgtgcaggagctgacgattgca
ctgcaaaggaccggagacccagccaacctcaacaggctgcggcctcacctggaactattg
gccaacattgatcccagtcctgatgctcctccacctacatgggagcagcttgagaagggt
ttggtagcagtgaaaacagtggtacatggcctggtggacttcattcagaatcatagcaag
aaaggagcggatcctcaacagcctcctcagcacagcaagtacaagacatacatgtgtcgc
gacatgaagcagaaaggaggctgtcctcgtggagccagctgtacctttgctcactctcag
gaagaactggagaagtaccgtaagatgaataagcgtcttgcagctcgactccccggtgca
ggagggctcttgtcagatgagggccttcctcttgatgtagcagtgacccggaagccttca
cccctcaccaatgggaatgttgcaccctctttgccccagctcattgctcgtggcacggac
accgtctcatacgaactattgcgcaaacctgtcaagatggatggagggaatcccagtgcc
ccaggatcaccacctgatgtcctggaccctgtgcccaaacccggtatgcctctgccacct
catgccatggcacacccaaggattgcagcagatcacctttctggagtgaagcacatgcct
gtggtagctagaggttcaccagtgtacccccagcctcaactccctgagatgtgctatgac
actcgcccaccaccttctgcctctcagtatgagcccccacagtaccccacagggtacccc
taccaacagccaccacagtatgttcctcgggattacatccgtaaccctcctccccccggt
gagtcaggacccccttaccaggacccttaccctggctatggccctcctgagcgcccctac
caggcccctcactctggcccacccttctcctatcctcaccctccacactatgacagaggt
cgccatgggacctacgctggtccaccacctcccccacagccttacccatctcagagggat
ggcttggttagaatgagtccagcacctttggatgttcccccaccatcagcaggacaggct
aactcactctaccaccaggagcacagttcccgggatagataccccccagatgcttactat
caaccaggtgcccaacctccacctatgaggacttatgtcagggggccgtcatatagtggt
tcacagcccagcctggactacctgcatcgacgtcggcaggagctgttatcccagctggag
gagaggaaggttatttcccctccgccgtttgctgcgtcacccactctttcacatcccttc
cccagtgattatcctcctgagtatggtgaggagagctccaaagctctagttaaatgcaga
gagcctgactatgcaggacaatactctccctggtcttgtgaaactattggctcgtacatt
ggcacaaaggatgtcaaacccaaagatgttatggttcctggcaccatggagatgatgaat
gtggaggctaaagctctgagggaaccatcattggaggctcctcggaggggtgcagaagta
aaggatgatgaccctattattccatttggtccccagcctactgtgtcacgctttggtgcc
atttcccgcacttcaaaaacaggctaccagaccactggtcctgtgcaggctatggcagcc
actccccagaaccccaactctaaacacatggccatgccagcagagtacacatatggaagc
catggaggatggggtggagcttcatacccctcccaccagactgcctcctcctctcaggga
cacttcagtgagcgcctgcctatggcagcctcggacagagaacagttaaagattgagctg
cagcaagtcaaccagcagatcactcaacagacccagatgcacagcatggaggctgccagt
aactctttactcctgcagagggaggccagtgcattggcaggtcagcctgtgcagtccagc
caggtccaggcagcagtcgccccgcaacagcaacagcccaagtggccagcagggggagca
agtgcaacagctgtctccagtgaacagctgagcctggagctccaccaggtggagagagag
attggcaagaggacccgtgagatggctatggaaaaccaagtagctcatgatgtgcagcag
tacaagatgaaacctgcagagaatggacagccagagcacaagactcagctagaagagatc
tccctggctcttggcgaggtgtcaaatggctccagcagtctgcaagaaagtgcagtgggc
gggtccatgctgtcactgacaaataagacgtctgcgctgggcctgtgttctgacccaggt
gccactggttcagaaatgcagaagaatggtgttgtccattcctgctcttag
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