Amphiprion ocellaris (clown anemonefish): 111572880
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Entry
111572880 CDS
T06018
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04010
MAPK signaling pathway
aoce04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111572880
04020 Calcium signaling pathway
111572880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111572880
Ion channels [BR:
aoce04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111572880
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GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
111572880
NCBI-ProteinID:
XP_054869636
Ensembl:
ENSAOCG00000033567
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Position
9:15705598..15723996
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AA seq
1281 aa
AA seq
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MSLLACVIQGMYEPCAASSSIRQALDVFTFSYFVVEILSKTVALGLFGSSGSVLTNHWNT
FDIFIIFAEIVDYILIDFGVNIEITHAIKPMRVISRVPALKDLVSVLLDILPMLGNVLIL
YAFVIHIFAVVGVQLWAGQLLNRCFLGEDIRTKYNVSLSPYFKYISSEKVPFICSPDASS
GVRHCIDIPPYRVNGTTCTLTAPNESVDANSCINWNVYYNVCQPGNQNPNVGAINFDNIG
YAWITIFQVVTLEGWTDIMHFFMDSYSFWSFVYFILVTIMGSTIIMNVCAVVIATHFSET
MERDTVEHHAGSVSVKSLCSTFTSWLRRIFHISRVHLSDSTVERNGPLVQAWIPLQRKLK
VIIDSSHFNRFIMAAIFLNVFAMAIEHHGQPEELTAFLQTTNLVFTILFLLEMIVKLLAL
SWMYFADQDNIFDFAIVIISLWEITSNADSKLSALRAFRVLRFGRLVHFLPYLRRQLLVL
RRTVGKSAPLCWLMLFFIFIFSILGMHLFGYKCSFETEFGHVTVDRKNFDSLLWSMLTVF
QILTQEDWHLLLYNAMAFTSPWAVTYFVAIIVLGKHVLLNVLVGIVVENYQAMPSENSEQ
ESSAAASVPGSSLPTSLVPRTDPSRTTQDSLCPHNPSRSDVTELSSGEQTAPTDANVDNR
SLTLIQKVHRWCKAHEDWSLYVFSPQNRCRVFCQRVNSHSTFDILVLFFILLSCITIAME
RPSIKPEHTERQILDVSSYIFTAVFSVEMLVKVIALGFLFGKESYCSSSWNIMDGILVIF
SLADVFIEVVTSGKNNVLGILKVFRLLRTLRPLRVIKRTPKLKLAVEALIASVKPMGNIV
LICSVFFFFFGIFGVQLFKGTFYHCVGQDLRNITNRNECITARYTWVRKEYNFDNLLQAL
ISLFVMYSKDGWVSIMYNGLDAVGVDQQPVKNYNKWVLLYFISFMIMSFFLLDMFIGVMV
ETFHQCQQKQRQGDEELEGEELQEQHTGKRVERLEIPYYTHYSPIRRDIHTLCTSKALDL
FITFAIIASVLVMAAEHHNQPEYVQRLTEYSQYVFTLILIIEVLLKLVAFGVIRFLKNRW
NLMDVIIVLTSIVSIVFGAMKMSQAFPINPNILRVFRVLRLTQVLKANTIRVLLKTVIKT
VLQVGNISLLFMFFFFIFAALGVELFGKIECSLDYPCKGLDRHANFSHFGMALLTLYKVC
TGDNWSGILKDTLRDCRPDDSECSSYLQWVAPIYLSSFVIMAQFVLINLVVAAIMQALED
SKENKPTNNGLPLEEENLPAT
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgctcgcttgtgtgattcagggcatgtatgagccctgtgcagcgagcagctcc
atccgacaggctttggatgtttttaccttttcctactttgtggtggaaatccttagcaag
acggtcgccctgggactctttggctccagtggaagtgtcctcaccaaccactggaacaca
tttgacatctttatcatctttgcagagattgtggactatattctgattgactttggggtc
aacattgaaataactcatgctatcaaaccaatgcgagtaatcagcagagtaccagcactg
aaagatttggtgtcagtactcttggacatcctgccaatgcttggaaatgttctcatcctc
tacgcatttgtcatccacatctttgctgttgttggagtccagctgtgggcagggcagctg
cttaaccgctgcttcttgggagaagacattagaacaaagtacaatgtatccctaagccca
tacttcaagtacatctctagtgaaaaagttccatttatctgttcgcctgacgcaagcagt
ggagtgaggcactgcatagatataccaccttaccgtgtcaatgggacaacctgcacactg
actgctccaaatgagtcagtcgatgcaaactcttgtataaactggaatgtgtactacaat
gtctgccagccagggaaccaaaacccaaacgtgggagcgatcaatttcgacaacatcggc
tatgcctggataacgattttccaggttgtcactcttgaaggatggacagatatcatgcat
tttttcatggattcttattccttctggagttttgtatattttatacttgtcaccattatg
ggctccactatcatcatgaatgtgtgtgcagtcgtcattgccacccacttctcagagacc
atggaaagagacacagtagagcatcatgctggttctgtgtcggtcaaaagcctctgttcc
acgttcacctcttggctgagaagaatcttccacatcagcagggtgcacctcagtgacagc
acggtagagagaaatggcccactggttcaggcctggatccctctccagagaaaactgaaa
gtgattattgacagcagccacttcaaccgattcatcatggctgccatttttctcaatgtt
ttcgccatggccatagagcatcatggccagcctgaagagttgacagcatttttgcaaaca
accaacttagttttcaccattctgtttttgctggagatgattgtaaagcttctggctctc
tcatggatgtactttgcagaccaagacaacatctttgactttgccatcgtgatcatcagt
ttatgggaaataacttccaacgccgacagcaagctgtcagctttgcgtgcatttcgtgtg
ctgcggtttgggaggcttgttcatttcctcccttacctgaggagacaactcctggtgttg
aggagaaccgttggaaagtccgccccgctctgctggctaatgctgtttttcattttcatt
tttagtatactgggaatgcacctgttcggttataaatgtagctttgagacagaatttgga
catgtcactgttgaccgaaaaaactttgacagcctactctggtccatgctcactgtgttc
cagattctgactcaggaggactggcatctgttgctgtataatgccatggccttcacctct
ccatgggctgttacctactttgttgccatcattgtgttgggaaaacatgttctcctcaat
gtacttgtaggcatagtggttgagaactaccaggctatgccttctgaaaattctgagcaa
gagtcctctgctgctgcctctgtgcctggcagctcacttccaaccagcttggtccccaga
acagacccttcaagaaccacacaagattctctctgtccacataaccccagcagatcagat
gtgaccgagttatccagtggggaacagactgcaccaacagatgctaacgtagacaatcga
tctttaaccttgatccagaaagtgcaccgctggtgtaaagcgcatgaagactggtcactg
tatgtgttttctccacagaacaggtgccgtgtattttgccagcgtgtgaactctcacagt
acgtttgacatcttggttttgttcttcattctactgagctgcatcaccattgctatggag
aggccaagtataaaacctgagcacacggaaagacagatcttggatgtgtcctcttatata
ttcactgctgtcttctcggtggagatgcttgtgaaggtcatagctctgggtttcctgttc
gggaaggagagctactgcagctcttcctggaacatcatggatggcatattagtgattttt
tctttagcagacgtctttatcgaagtggtcacgtctggcaaaaataacgtgctgggcatc
ctcaaagttttccgcctgctgcgcacacttcgcccactgagggtgatcaagcgaaccccg
aaactgaagctggcagtggaagctctgattgcctcagttaaacccatggggaacattgtt
ctcatttgctccgtcttcttctttttttttggcatttttggggtgcagttgttcaaaggg
acgttctaccactgtgtgggccaggacctacgaaacatcaccaacaggaatgaatgtatc
actgccagatatacctgggtacggaaggagtacaactttgacaacctccttcaggctctg
atatccctgtttgtgatgtactctaaggacggctgggtgagcatcatgtataacgggctg
gatgctgtaggagtagatcaacagcctgtgaaaaactacaacaagtgggtgctcctttac
ttcatctctttcatgatcatgagctttttccttctggacatgtttattggtgtaatggtg
gagaccttccaccagtgtcagcagaagcaacgacaaggagacgaggagttggaaggagaa
gagttacaagaacaacacacgggtaagagagtggagaggctagagataccttactacaca
cactactcccccatacggcgggatatacatactttgtgcaccagcaaggccctggatctc
ttcataacattcgctattatcgccagtgtcttggtcatggcagctgaacaccataatcag
cccgagtacgtccagaggctcacagagtactctcagtatgtgttcacgctcatcctgatc
attgaagtcctgctgaagctggtggcgtttggtgtaatcaggttcctgaaaaacaggtgg
aatctgatggatgtcattatagttttgacttcaatcgtcagtattgtttttggcgcgatg
aaaatgtcacaagcatttccaatcaatcccaacatcctgagggtctttagagtactcaga
ctaacgcaagtgctgaaggccaacacgataagagttttgctgaaaaccgttattaagaca
gtgttacaggttggaaacatttctcttctcttcatgttcttcttcttcatctttgctgca
ctgggagtggagctctttggcaaaatagaatgcagcctagattacccttgcaagggttta
gatcggcacgccaacttcagccacttcgggatggccctgctcacgctgtacaaggtgtgc
actggagacaactggagcggtattttgaaagacacactgagagattgtcgtcctgatgac
agcgagtgttctagctacctgcagtgggttgctcccatctacttgtccagttttgtgatc
atggcccagtttgtgctgataaacctggtagtggcagcaatcatgcaggctctggaagac
agcaaggagaacaaacctactaacaacggactcccgctggaggaggaaaacctaccagcc
acatga
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