Amphiprion ocellaris (clown anemonefish): 111572931
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Entry
111572931 CDS
T06018
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aoce03016
]
111572931 (cdkal1)
Enzymes [BR:
aoce01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
111572931 (cdkal1)
Transfer RNA biogenesis [BR:
aoce03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
111572931 (cdkal1)
Prokaryotic type
Methylthiotransferases
111572931 (cdkal1)
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Paralog
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Glyco_hydro_120_ins
Motif
Other DBs
NCBI-GeneID:
111572931
NCBI-ProteinID:
XP_023132592
Ensembl:
ENSAOCG00000010752
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All DBs
Position
9:24249500..24511556
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AA seq
556 aa
AA seq
DB search
MPSACDSLIDDIEDMVSSSDPTPHERQSARKSIIPRSRRKKELNNEELQVDSLIPGTQKI
WMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPTEADVWLLNSCTVKNPAEDHFRNSIKKA
TEQQKKVVVAGCVPQAQPRMEYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDGG
RRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQSF
QEGVCEIWLTSEDTGAYGRDIGTDLPKLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEMA
KILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFKRVVDFLKQRVPGVTIATDIICGF
PGETDEDFQETVDLVKCYRFPSLFINQFYPRPGTPAAKMEQVAAHVKKQRTKELSQLFHS
YNPYDHEVGERQHVLVTEESFDGQYYVAHNKFYEQVLVPKRVEFKGKMIEVDIYEAGKHF
LKGQPVEHSKPFTPSIAAPLQKGEVSGLMQEHLANGIQGSSFLIGSSSVDREALKKLGIG
LALAAIILAFIVEKLY
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgcctgtgactctctgatcgatgacatcgaggacatggtgtcttccagcgac
cctactcctcatgagagacagtccgctagaaaaagcatcataccgaggtccaggaggaag
aaagagctgaacaacgaggagctccaagttgacagtctgatccccggaacccaaaagatc
tggatgaaaacgtggggctgcagtcacaacaactcagatggagagtacatggccggacag
ctcgctgccagtggatacaagatgaccgatgacccgacagaagcagacgtgtggttgctg
aacagctgcaccgtgaaaaatcctgcagaggatcacttcagaaactccatcaaaaaagcc
acagaacagcagaaaaaggtggtagtagcaggatgtgttccccaggcccagccgaggatg
gagtacctcaaaggtctgagcatcattggggtccagcagattgatcgagtggtggaagta
gtggacgaggctgttaaaggtcactcggttcgtctgttgggtcaaaagaaagatggaggc
cgacggctcggaggagctcgactggatctgcccaagatcaggaagaacccactgatcgaa
atcatctccattaacacggggtgtctgaatgcttgtacctactgcaagacgaagcatgcc
agaggagacctggccagctatcccatcgaggagctggtggagagagccaggcagtcattc
caggagggggtgtgtgagatctggctgaccagtgaggataccggtgcttacggtagagac
atcgggaccgacctgccgaagctgctgtggagactagtggaggagattcctgaaggagcc
atgctgaggctggggatgaccaacccaccttacatcctggaacacctggaggagatggcg
aagattttgaaccatccgcgagtctacgccttcctccacgttcctgtgcagtcggcctca
gacagtgttctgatggacatgaagagagagtattgcatcgacgacttcaaacgagtggtg
gacttcctgaagcagagagtccccggtgtgaccattgctacagatataatctgcggtttt
cctggtgagactgatgaagacttccaggagacagttgatttggtgaaatgctaccgattc
cccagccttttcatcaatcagttttacccccgacccggtactcctgctgccaagatggag
caagtagctgcacatgtgaaaaaacaaaggacaaaagagctctcacaactcttccactct
tacaacccgtacgaccacgaggtaggagaaagacaacatgtgctggtgacagaggaatca
tttgatggacaatactacgtggctcacaacaagttctacgaacaggtgctggtacctaag
agggttgaattcaaagggaagatgatcgaggtggacatctatgaagcaggaaaacacttc
ttgaaaggacaaccagtcgaacacagcaaaccgttcaccccctccatcgctgcacctctt
cagaaaggagaggtatctggtttgatgcaggaacatctggccaatggaatccaaggttct
tctttcttgattggatcctccagtgtggatcgagaagcgctgaagaagttggggatcgga
ctcgcactggcagcaatcatcttagcctttattgtagagaaactgtactga
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