Amphiprion ocellaris (clown anemonefish): 111573062
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Entry
111573062 CDS
T06018
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04080
Neuroactive ligand-receptor interaction
aoce04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111573062 (gabra4)
04082 Neuroactive ligand signaling
111573062 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111573062 (gabra4)
Ion channels [BR:
aoce04040
]
Ligand-gated channels
GABA-A
111573062 (gabra4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
FAM199X
Motif
Other DBs
NCBI-GeneID:
111573062
NCBI-ProteinID:
XP_023132782
Ensembl:
ENSAOCG00000006282
LinkDB
All DBs
Position
13:30503655..30531067
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AA seq
556 aa
AA seq
DB search
MVSANEKEMVTATRPAFIRTLFYFFCLATCVKKICAQTKKDERIYPENFTRILDRLLDGY
DNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLMYEGPIEILRL
NNLMVTKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLVDF
PMDGHACPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETIKSI
TGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQIERAKKKPAKCP
PVPQTTPVKVKDTEEVLQQNPDTNGNLRKRMNYISHLEPSSQLRAQSTTNISGIGRGRPL
RPLASGANGSSSTLSRSSPKSESLLSVASSSTQLVKNAPQAAASTPDVMAGTPCKQNTSS
SSLQHLLGPKLERIQMMGNKLEPKQTPCSQPTTAGMGGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTMVAKGG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaacgagaaggagatggtgacagcgacgcgccccgcttttattcggacc
ctcttctactttttctgtttggccacttgtgtgaagaaaatctgtgcacaaacaaagaag
gatgaaaggatctatccggagaattttacgcgcattttggaccgacttctggacggttat
gacaacaggctgcgacctggatttggaggtcctgtgactgaggtcaagactgatatttat
gtgacaagctttgggcccgtctcagatgttgaaatggaatacacaatggacgtattcttc
cggcagacgtgggtggaccggaggttgatgtacgaaggtcccatagagattttgaggctg
aacaacctgatggtgaccaaagtttggacgccggacaccttcttcaggaacggcaagaag
tccgtcgctcacaacatgacggcccctaacaagctcttccgcatcatgaagaacggcacc
atcctctacaccatgaggttgactatcagcgctgagtgtcccatgaagctggtggatttc
cccatggacggacacgcttgtcccctcaaatttgggagctatgcctatccaaaaacagag
atgatctatacttggaccaaagggccgcagcattcggtggaggtccctcctgagtcctcc
agcctcgttcagtatgatctcatcggccagacggtctccagtgaaacgattaaatccatc
acaggtgaatatgtggtgatgacggtctacttccacttgaaacgtaaaatgggctacttc
atgattcagacgtatatcccctgcataatgacagtaatcctctcccaagtgtccttctgg
ataaataaagaatcggtcccggcacgcacagtttttggcatcaccaccgtcctgaccatg
acgacactcagcatcagtgctcgacactccctccctaaggtctcctacgccaccgccatg
gactggttcatcgccgtctgcttcgcctttgtcttctctgccctcattgagtttgccgct
gtcaactacttcaccaatgcacagattgagcgggccaaaaagaagcctgccaaatgtccg
ccggtgccccaaaccacgcctgtcaaggtcaaagacacggaggaagtgctgcagcaaaat
cctgacaccaacggcaacctgaggaaacggatgaactacatctcccacctagagccgagc
agtcagctgagagctcagtccaccaccaacatttcaggaataggaagaggaagaccgctg
cgacctttagccagcggagctaacggcagctcctccaccttgtcgcgttccagccccaag
tctgagagtctgctgagcgtggcctcgtcctccacccagctggtgaagaatgcgcctcag
gctgcagcttccacgccagacgtcatggccgggacgccgtgcaaacagaacaccagctcc
tcatccctgcagcatctgctggggcccaagctggagcgcatccagatgatggggaacaaa
ctggagccaaagcagacgccgtgttctcagcccaccactgctgggatgggaggaaccagt
aaaattgacaagtatgcacggatcctgttcccagtgtcctttggtgcatttaacatggtc
tactgggtggtttacttatccaaggacacgatggtggctaaaggtggctag
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