Amphiprion ocellaris (clown anemonefish): 111573103
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Entry
111573103 CDS
T06018
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111573103 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aoce04990
]
111573103 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
aoce04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
111573103 (pdlim1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
111573103
NCBI-ProteinID:
XP_023132862
Ensembl:
ENSAOCG00000004993
LinkDB
All DBs
Position
16:complement(19023658..19032218)
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AA seq
322 aa
AA seq
DB search
MPLRVVIQGPGPWGFRLVGGKDFEQPLAISRVNPGSKAAQANLCVGDIIMAIDGEPTENM
THLEAQNKIKGCIEEMVLSIDRSETKLWSPLSSEEGKTHPYKMNLASEPREVKHIGSTHN
RSALPFTGFGSKVVTNQYNSPSGLYSSENIKNFNSSVDEVKTMATANNPNNIVPSDPSKS
GKRPPVAADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDSDKPSGFRSVKAPTTKI
GSSVGNAEKLPICDKCGSGIVGMVVKLRDKFRHPDCYTCTDCDVNLKQKGHFFVEDQIYC
EKHARERVTPPEGYDVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgggtggtgattcagggtccggggccctggggcttcaggctggtcgggggg
aaggacttcgagcagccgctggctatttcccgggtcaaccccgggagtaaagcagcccaa
gccaacctttgcgtcggagacataatcatggcgatcgatggagagccgacagagaacatg
actcacttggaagcacagaacaagatcaagggctgcatagaggaaatggtgctctccata
gacaggtcagaaactaaattgtggtcgccgctttcgtctgaggaagggaaaacgcatccg
tacaagatgaatcttgcatcagagcctcgggaggtgaaacacataggctccacccacaac
aggagcgccctgcctttcactggttttggctccaaagttgtgaccaaccagtacaacagc
ccctctggtctgtactcctcagagaacatcaagaacttcaactcatcagtggacgaagtg
aagaccatggctacagccaacaaccccaacaacatagttccatcagatccgtcaaagtca
ggcaagcggccgcctgtagcagcagattcagaggtctacaagatgctgcaggagaaccag
gagtctgatgagcctcctcgacagtcggcttctttcaaggtgcttcaggagattcttgaa
acaggtgactcagacaaaccatcaggcttcaggagtgtgaaagcacctacaacaaagatc
ggatcatcagtggggaacgctgagaagttacccatctgtgacaaatgtggatctgggatt
gtggggatggtggtgaagttgagagacaagttccgtcaccccgactgctacacctgcaca
gactgcgacgtcaacctaaaacagaagggacatttctttgtggaggaccagatttactgt
gagaaacacgcacgtgagcgagtgaccccacctgagggctatgacgtggtcaccgtcttc
cccaagtag
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