Amphiprion ocellaris (clown anemonefish): 111573219
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Entry
111573219 CDS
T06018
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111573219 (clstn1)
Cell adhesion molecules [BR:
aoce04515
]
Cadherins
Cadherin related
111573219 (clstn1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Toxin_R_bind_N
CDC45
Laminin_G_2
FAM176
PRIMA1
V_ATPase_I
EphA2_TM
Cadherin_C_2
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
111573219
NCBI-ProteinID:
XP_023133026
Ensembl:
ENSAOCG00000020668
UniProt:
A0AAQ6AE79
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Position
8:33759698..33803382
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AA seq
981 aa
AA seq
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MRFRGNKRFASVVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICNYEIVTPDVPFTIDKDGFIKNTEKLSYGKEHMYKLTVTAYDCG
KNRASEDVLVKISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRATV
ELETSHIGKGCDRDTYSEKSLHKLCGASSGTVELLPAPSSSANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPDGMVSTSLKDPFTISVWMRHGPGAHEKETILCNSDKTDMNRHHYSLYIH
NCRLIFLLRQDPSEAENYKPAEFHWKLDQVCDKEWHHYVLNVEFPSVSLFVDGTTFEPFL
VTEDYPLHASKIETQLTIGACWQENSGHDNDTETVSEPTSGANARMAQFFRGNLAGLIIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNQSSLTVEGDDIDAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEESCVTVPDAEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESQEGVTLFPEMRIVSTITREVEADTESEAAEGADDDPTVQETVVSEEIMHNLDT
CEVTVVGDELDGEHESLEVDMTQLQQRALEMSSSNLGLVITGVNTMANYEQVLHLIRYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTANPMEHSNNAMVQPNFINPVHHAS
VDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQENGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEDGEEEDDITSAESESSEDEEGGEP
EDQQGASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccgagggaataaacgatttgcatccgttgtcggactggtcctcggactgttg
tgcgcggtggaggcagcgaaagtcaataaacacaaaccatggatcgagacgacgtaccac
gggatcgtaacggaaaatgatgacaaagttcttctggaccctcctctaattgctctggac
aaagatgctcctctacgctatgcagagagttttgaggtgaccctcactgaagaaggtgag
atttgcggcttcagaatccacgggcagaatgtccctttcgaggcagtcgtgctggacaag
tccactggcgagggggttatcagggccaaggacaagctggactgcgagctgcagaaggag
cacaccttcaccatccaggcctacgactgtggagagggtcctgatggtgccaacatgaag
aaatcccacaaggcaactgtccacatccaggtgaatgatatcaatgagtattcaccggtg
ttcaaggagaagtcctacaaagccactgttattgaggggaagaagtacgacagcatactg
aaggtggaggcagtggatgccgactgctccttccagttcagccaaatctgcaactatgag
attgtgacccctgatgtgcccttcaccatcgacaaagacggcttcatcaagaacaccgag
aaactgagctacggcaaagaacacatgtacaagttgacggtgacggcctacgactgtgga
aagaaccgtgcctctgaggacgtgctggtcaagatcagcgtcaagcccacctgcaaaccc
agctggcaaggcttcaacaagaggattgaatacgagcctggcacaggtagcctggcactt
ttccccagcatgcacttggagacctgtgatgagccaatcacatccatccgagccaccgtc
gagctggaaaccagccatattgggaagggctgtgaccgtgatacctattctgagaagtcc
ctgcacaagttatgcggagccagctccggcaccgtggagctcctccctgcacccagcagc
tccgccaactggacggttggactgcccactgataacgggcatgacagcgaccaggtgttt
gagttcaacggcacccaggctatcaaggttcctgatggtatggtgagcaccagcctgaag
gaccccttcaccatttctgtgtggatgagacacggccccggggcccatgaaaaggaaacc
atcctctgcaactctgacaagacagatatgaacagacatcactactcgctctacatccac
aactgcaggctgatcttcctcctacgccaggatccatcggaggcagagaactacaaacca
gcagagtttcactggaagctcgaccaggtatgtgacaaagagtggcatcactatgtgctg
aatgtggagttcccctctgtgtctttgtttgtggatgggaccacctttgagcccttcctg
gttacagaggactacccgctgcacgcctccaagattgaaactcagctcaccattggtgct
tgctggcaagaaaactcaggacatgacaatgacactgagacagtctctgagcccacctca
ggcgcaaatgctcggatggctcagtttttccgagggaaccttgcggggctgatcatccgc
tctggcaagctggagaacaagaaggtgatcgactgtttgtacacctgcaaggaaggactg
gacgtgcagctgcccgaggaggtagcttcagctgtcaaggtggagttcaaccccaaccag
tcctctctgaccgtggagggcgacgacattgatgcctttgacaaggtcatgcagcacatc
tcttacctgaactcccgtcagttcccaacccctggcatcaggcacctccgcatctccacc
actgtaaagtgcttcaatgaggagtcctgtgtgacggtgccagatgctgaaggttacgtg
atggtgctgcagccggaggagcccaagatcagcctgagcggcatcgaccacttcgcccgc
agcgccgccgaattcgagagccaggaaggagtgacgctgttccccgagatgcgcatcgtg
agcaccatcacccgcgaagtggaggctgacaccgagtcagaagctgcagagggagctgac
gacgaccccacagtccaagagacggtggtgtcggaggagatcatgcacaacctggacacg
tgtgaagtgactgtggtgggagacgagctggacggggaacacgagagcctggaggtggac
atgacccagctgcagcagcgagccttggagatgagctcatccaacctgggcctcgtcatc
actggtgtgaacaccatggccaactatgagcaggtcctacacctgatccgctacaagaac
tggcacaccgaggctctctttgacaggaaattcaaactggtctgctccgagctcaacggg
cgctacatcagcaacgacttcaaggtcgaggtaaatgtaatccacacagccaatcctatg
gagcattccaacaacgccatggtgcagcccaacttcattaaccccgtccatcatgcctca
gtggatctgtcaggtcacaacctggtcaacgctcaccaggcctcagtggttcccagcgct
gccaccattgtcattgtggtgtgcgtcagcttcctggtgttcatgatcatcctgggcgtg
ttccgcatccgagctgcgcaccaacgcaccatgagagaccaggagaacggcaaagagaac
gagatggactgggacgactcggccctgaccatcaccgtcaaccccatggagacgtacgag
gaccagcacagcagcgaggaggaggaggaagaggaggaggagagcgaggacggagaggag
gaagacgacatcacaagcgccgagtcagagagcagcgaggacgaggagggcggcgagccg
gaggaccagcagggggcgagcagacagcagcagctggagtgggacgactctaccctcacc
tactga
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