Amphiprion ocellaris (clown anemonefish): 111573349
Help
Entry
111573349 CDS
T06018
Symbol
vps50
Name
(RefSeq) syndetin isoform X2
KO
K23288
syndetin
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111573349 (vps50)
Membrane trafficking [BR:
aoce04131
]
Protein recycling
Others
EARP complex
111573349 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
111573349
NCBI-ProteinID:
XP_023133234
Ensembl:
ENSAOCG00000015557
LinkDB
All DBs
Position
15:11643195..11760551
Genome browser
AA seq
967 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELREMREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQETTPTPDD
AAAAESDELMVDHSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSVSPSRQAACSTSPPQEELSLFQQYLQEGNPFEMHIEHKEEETED
VLASNGYESDELEKSVYQDYDSDSDVPDELKQDYVDEQTGDVPQKSVSRETIRSKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMYESSGLGLISSRLRTTLNRIQESLIDMEAGGENAGVHGPTEDRKEKVPSPHLSQMVVL
TSSGTLYGLAQRVVATESLVFLAEQFESLQSHLDTMMPAAKKPFLQQFYSQTVSTASELR
KPIYWIVAAKAIDYEQMLLMMAGVKWDIREIMSQHNVYVDVLLKEFEQFNKRLGDVSRHV
RIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPI
PDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctctcatggcccgacagggcctgaaaagcccccaggagagcatg
gcagacctgagtcctgtggagaacctgaggatccccagcaaggaggagttgcgggagatg
agggagcagcccatcgacccccaggcggaacaggagattatcgacagcatcgaggaggtc
tacttctcaaacgactccttcgacatggtgcagcacgaactggagaaactcccacctgag
ctgaacctgcaggagctggaggagtacagagacaagctcaaaagacaacaggctgcagtt
tctaaaaaggtcgctgatctcatcctggagaaacagcctgcttatgtaaaggagctggag
agagtgacggcgttacagaccaacctccagctggcagcagtcatttgcactaatgcaagg
aggcaactgagcgtggcgaaggaaggattcaccgaggccagtctaggtctgctggctaat
caaagaagacggcaactgctgacaggcctgctcaagtctctgaggactatcaagaccctg
caaagaactgatgtcagactcagtgagatgctcgaggaggaagactatccaggtgcaatc
cagctctgtctggaatgtcagaaagctgccagcaccttcaaacactacagctgcatcagt
gaattgaattccaaactgcaagacactctagagcaaatcgaggagcagcttgatgtcgcc
ctgtcgaagacttgtaagcactttgatgtttcgcactacaccaaggtccagctggcctac
acgctcctgggtaaaacacagactgctatggaccagttgcacatgcacttcacccaggcc
atccacaacactgtgttccaagtggtgctgggatacgttgagctgtgtgccggcaacgct
gacaccaagttccagaagatgcagtacaaggacctgtgcacgcatatcaccttagacagc
tacattccctgcctgacggatctgtgcaaggcattgtgggaggtgatgctgagctaccac
cgcactatgcagtggcacgaggagcatgacaaacaggagaccacacccaccccagatgat
gcagcagcagcagagtctgatgagttgatggtggaccacagctatgtaaagaagaaactg
gagcacggactgacacggatctggcaggatgtccagttgaaagtgaaggcctacatcctg
ggtacagacatgtcaaacttcaaatacgacgatttcatagtggtactggatgtcatcagc
aggttgatgcaggtgggtgaggagttctgtggcagtaagtcagaggtcctgcaggagtcc
atcaaacgccagagtgtcaactactttaaaaactatcacagggcacgactagaagagctg
aggatgtttctggaaaatgagacgtgggaactgtgtccagtcaagtctaacttcaacatt
gcccagctccatgagtttaagtttatgggccagtgtcgctctccatctgtttccccgagc
agacaggctgcgtgttcaaccagcccacctcaggaggagctgtctctgttccagcagtac
cttcaggagggaaacccttttgagatgcatattgagcacaaagaggaggagacagaggat
gtgctggcatctaatggatacgagtcggatgagctggagaagagtgtgtaccaggattac
gacagcgacagcgatgtccctgatgagctgaagcaggactacgttgatgagcagacaggt
gacgttcctcaaaagagtgtgtcccgagagaccataagaagcaagaaaaagtccgactac
aaccttaacaagaccaacgcacccattctcaccaacaccaccctcaatgtcatccgtctt
gtcggaaagtacatgcagatgatgaacattctgaagccaattgccttcgatgtgatccac
tgtgtatcacagctcttcgattactacctgtacgccgtatacaccttctttggacgtaat
gacatgtatgagtcatcgggtctgggccttatcagcagcagactgagaaccacactgaac
cggatccaggagagcctcattgacatggaggctggcggggagaatgcaggagtccacggt
ccgacagaggacaggaaggagaaggtccccagcccccatctcagccaaatggtggtcctc
actagcagtgggactctgtatggcctggcacagagggtggtagccactgagtcccttgta
tttctggctgaacagtttgaatctctccagtcccacttggacacaatgatgcctgcagcc
aagaagcccttcctacagcagttttattcccagacggtgtctacagccagtgaactgcgg
aaaccgatatactggattgtggcagccaaggccatcgactacgaacagatgttgctcatg
atggctggagttaaatgggacattagggagataatgtcacagcataacgtatacgtggac
gtcttattaaaggagtttgagcagttcaacaagcggctgggtgacgtttccagacatgtg
cgcatcccgctgcctgtgtccaacgtcctgtgggagcactgcatccgcctggccaacagg
actctagtcgagggctatgctaatgtgaagaaatgcagcaatgagggtcgggccctgatg
cagctggactttcagcagttcctgatgaagctggagaagctgactgacctgcggcccatc
cctgataaggagtttgtggaaacctacatcaaggcctattacctgactgagaatgatatg
gagcagttcatcaagaatcaccgggagtactccatgaagcagctagccaacttggtgaac
gtctgtctgggttcacatataaacaagaaggctcgtcagaaacttctggcggctatcgac
gacattgacaggcccaagagatag
DBGET
integrated database retrieval system
