Amphiprion ocellaris (clown anemonefish): 111573403
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Entry
111573403 CDS
T06018
Name
(RefSeq) retinoic acid receptor beta isoform X1
KO
K08528
retinoic acid receptor beta
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111573403
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aoce03310
]
111573403
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111573403
Nuclear receptors [BR:
aoce03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
111573403
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111573403
NCBI-ProteinID:
XP_035807432
Ensembl:
ENSAOCG00000013692
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Position
15:complement(21002915..21237485)
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AA seq
506 aa
AA seq
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MKTASRAQPRSSPPLVQMRRYTPAVYPFLFPSVISSLPQLPPPSPQRLQIQQPSSSGSTP
SPVAIETQSTSSEELVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI
QKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFGVGMSKESVRNDRNKKKKESPKPELAE
SYELTAELETIIEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCI
IKIVEFAKRVPGFTGLTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLNRTQ
MHNAGFGPLTDLVFTFANQLLPIEMDDTETGLLSAICLISGDRQDLEEPSKVDQLQEPLL
EALKIYVRKRRPSKPHMFPKTLMKITDLRSISAKGAERVISLKMEIPGSMPPLIQEMLEN
SEGQDGQSSSSSSSSSSSSSSKSSSSKSSNSKSSSSSSSSSSSSTSAEAGASPSSKGSPS
EDATALESPESLDTEGATATPPSDEP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgccagccgtgcccagccccgcagcagtcctccgctggtccagatgaggcgc
tacacgcccgctgtctatcccttcctgttcccctctgtcatcagctccctgcctcagctg
ccgccgccatcacctcagagactgcagatccagcagccgtccagcagcggcagcaccccg
tcgcctgttgccattgaaacgcagagcaccagttctgaggagctcgtccccagcccgcca
tccccgccgccccctccccgggtctacaagccctgctttgtctgccaggacaagtcctct
ggataccactatggtgtcagtgcatgtgagggctgcaagggttttttccgtcgaagcatc
cagaagaatatggtgtacacgtgtcatcgggacaagaactgcattatcaacaaggtgacg
aggaaccgctgtcagtactgccgcctgcagaagtgcttcggagtggggatgtccaaagag
tctgttcgaaatgaccggaataagaagaagaaggagagcccaaagccagagctggcagag
agctacgagctgacagccgagctggagaccatcattgaaaagattcgtaaggcccatcaa
gaaaccttcccctccctctgccagcttggcaaatacaccacgaactcgagtgcagaccac
cgtgtgaggctggacctgggcctgtgggacaagttcagtgagctggccactaagtgcatt
atcaagatcgtggagtttgccaaaagagtgcctggcttcacggggctgaccatcgcggac
cagatcacgctcctgaaagctgcctgcctggacattctgatcctgcgcatctgtacgagg
tacacccccgaccaggacaccatgactttttcagacgggctgactctcaaccggacgcag
atgcacaacgctggcttcggcccgctcaccgacttggtgttcacttttgccaaccagctg
ctgcccatcgagatggacgacacggagacaggcctcctcagcgccatctgtctcatctcg
ggagaccgtcaggacctggaggagccctctaaggtggaccagcttcaggagccactgctg
gaagctctgaagatctatgtgaggaagcggcgacccagcaaaccacacatgttccccaaa
accctgatgaagatcacagatctgcgaagcatcagtgctaaaggagcagagcgggtcatc
tccctgaagatggagattcctggttccatgccgccactcatccaggagatgctggagaat
tcagagggccaagacggccagagcagcagcagcagcagcagcagcagcagcagcagcagc
agcaaaagcagcagcagcaaaagcagcaacagcaaaagcagcagcagcagcagcagcagc
agcagcagcagcacttcagccgaggcgggggccagtcccagcagcaagggcagccccagc
gaggatgccaccgctctggagtcaccggagtccttggacaccgagggggcaacggccaca
ccacccagcgacgagccctag
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