Amphiprion ocellaris (clown anemonefish): 111573571
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Entry
111573571 CDS
T06018
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aoce03016
]
111573571 (tsen34)
Enzymes [BR:
aoce01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
111573571 (tsen34)
Transfer RNA biogenesis [BR:
aoce03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
111573571 (tsen34)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
SCAI
DUF2946
Motif
Other DBs
NCBI-GeneID:
111573571
NCBI-ProteinID:
XP_023133572
Ensembl:
ENSAOCG00000030855
LinkDB
All DBs
Position
7:34753527..34787590
Genome browser
AA seq
290 aa
AA seq
DB search
MEDSPSMDDHQDSSLVVGVGLCDSAPLLWRLQDLKTARRLGLVGALLGSLPRTPRQNQRL
GRPLLLLPEEEQLLRDEEAAGALPGPNQDVGGAELRRQFEEDQQRSFEEQSVLALEDRKS
ALRRAMTSSHTGSESGAEAVDEALCGRLEALDHSFSFPQSAMAVQLSTARAGLSYCPEAR
AHLQASWPIREQNNPRSDARYQVFRDLRGRGFYLTSAGKFGGDFLVYPGDPLRFHAHFIA
VCLTLDESICLLDVLAVARLGSNVKKTVLLCSPVPDGGVCYTSLQWSGMV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaggattctccctctatggacgatcatcaggactcctcactggttgtgggcgtcggc
ctctgtgactccgcccctctgctgtggcggctgcaggacctgaagacagccaggcgtctt
ggtctggtgggggcgctgctgggctcgctgcccagaactccccgacagaaccaacgtctg
ggccgaccgctactactgctgccggaggaggagcagctgctgagagacgaggaggcagct
ggagccctgccaggaccaaaccaggacgtcgggggggcggagctccggcggcagttcgag
gaggatcagcagaggagcttcgaggagcaaagtgttctcgctctggaggacaggaagtca
gcgctgcgccgagccatgacatcatcacacacaggttcagagtccggagctgaggctgtg
gatgaggccctctgcggccgcctggaggccctagaccacagcttttccttccctcagtcg
gcaatggcggtccagctgagcacggcgagggcggggcttagttactgccccgaagcccgg
gctcacctgcaggccagctggccaatcagagagcaaaataacccccgcagtgacgccagg
taccaggtgttcagagacctgagggggcggggcttctacctgacttcagccgggaagttc
ggaggagacttcctagtttatccgggtgaccctcttcgtttccacgcccacttcatcgcc
gtctgtctgacgctggacgagtccatctgtctgctagacgtcctcgctgtggctcggctc
ggatccaacgtcaagaagacggtgctgctctgctcgccggtgccagacggaggtgtttgt
tacacgtcactgcagtggagcgggatggtctga
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integrated database retrieval system
