Amphiprion ocellaris (clown anemonefish): 111573615
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Entry
111573615 CDS
T06018
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03020
RNA polymerase
aoce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111573615 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
111573615 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111573615 (polr2b)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111573615 (polr2b)
Enzymes [BR:
aoce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111573615 (polr2b)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111573615 (polr2b)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111573615 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
111573615
NCBI-ProteinID:
XP_023133626
Ensembl:
ENSAOCG00000005752
LinkDB
All DBs
Position
13:1565114..1577240
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDEDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFVGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagataatcagtatgatgaggacgaggatgaaatcactccagat
ctgtggcaggaagcctgctggatcgtcatcagctcttattttgacgagaagggtctggtg
cggcagcagctggattcgttcgatgagttcatccagatgtcggtccagaggattgtggag
gacgctccgcccatcgacctgcaggctgaagctcagcacacatctggggaggtggaggaa
ccgcctcgatacctgctgaagtttgagcagatctacctctccaagcccactcactgggag
agagacggagctccgtctccaatgatgcccaatgaagctcgactacgaaacctcacgtat
tcggcccccctgtacgttgacatcactaagaccatcataaaggagggggaggaccagctg
cagactcaacaccagaagaccttcatcggtaaaattcccatcatgcttcgctccacctac
tgcctgctgagcggcctaacggacagagacctgtgtgagctgaacgagtgtccactggat
cctggaggttatttcatcatcaacggctccgagaaggtgctgattgctcaggagaagatg
gccaccaacaccgtgtacgtctttgccaagaaggactcaaagtacgcctacacagccgag
tgccggtcctgtctggagaactcatctcgtcccaccagcaccatctgggtcagcatgatg
gccagaggaggacagggagtgaagaagagcgccatcggtcaaaggatcgtctctacgctg
ccctacatcagacaggaggttcccatcatcatcgtgttccgagctctgggcttcgtgtcc
gacagagacattctggagcacatcatctacgactttgacgaccctgagatgatggagatg
gtgaagccgtctctggatgaagcgtttgtgatccaggagcagaacgtggcgctgaacttc
atcggttccagaggagccaaacctggagtgacgaaggagcgacgaatcaaatacgccaaa
gaagttctgcagaaagagatgctgccccatgtgggagtcagcgacttctgtgagaccaag
aaggcttacttcttagggtacatggtccacaggttgctgctcgctgctctgggacgccga
gagctggacgacagagatcactacggcaacaagaggctggacctcgctgggccgctattg
gccttcctgttcaggggcatgtttaagaacctgctgaaggagatcaggatttatgctcag
aagttcattgacagaggaaaagacttcaacctggagctcgctatcaaaactcgaatcatc
tcagacggacttaaatactcactggctactggaaactggggcgacgtcaagaaagctcac
caggcccgagccggagtgtctcaggtgttgaatcgtctgacctttgcatccactctgtct
catcttcgccgagtcaactctcccatcggcagagacggaaaactggccaaaccccgacag
ctgcacaacacgctgtggggaatggtgtgtcctgctgagacacctgagggtcatgctgtg
ggtctggtgaagaacctggccctcatggcctacatctctgtgggttcacagccgtctccc
atcctggagtttctggaggagtggagtatggagaacctggaggagatttcaccagctgcc
atcgctgatgccactaaaatctttgtgaacggctgctgggtcggaatccacaaagatcca
gagcagctgatgaacacactgaggaaactccgcagacagatggacatcatcgtgtctgag
gtgtccatgatcagagacattcgagaacgtgagatcagaatttacactgacgctggacga
atctgtcgaccgctgctgatcgtagagaaacagaaactgctgctgaagagacgccacatc
gaccagctgaaggagagagagtacaacaactacagctggcaggacctggtggccagcggc
gtggtggagtacatcgacaccttggaggaggagaccgtcatgctcgccatgacccccgat
gacctccaggaaaagggcgtggcttactgctccacctacacccactgtgagatccatcca
tccatgatcctaggagtctgtgcttccatcattccttttcctgaccacaaccagtctcct
aggaacacctatcagtcggctatgggcaaacaggccatgggcgtctacatcaccaacttc
catgtacggatggacacgctagctcatgtgttgtactaccctcagaaaccgctggtcacc
acccgatccatggagtacctgcgcttcagagagctacctgcaggcattaactccatcgtg
gcgattgcctcgtacacgggctacaaccaggaggactctgtgatcatgaacaggtcggct
gtggaccgaggcttcttcaggtctgttttctatcgatcctacaaagagcaggagtctaag
aaaggctttgatcaggaggagatctttgagaagccgactcgtgaaacctgtcagggtatg
agacacgccatttatgacaagctggacgatgacgggctcatcgcgcccggcgttcgtgtg
tctggggaggacgtgatcatcgggaagacggtcacgctgccggagaatgacgacgagctg
gacagcaccaaccgacgctacaccaagagagactgcagcaccttcctgagaaccagcgag
accggcatcgtggaccaggtcatggtgaccctcaaccaggagggatacaagttctgcaag
atcagggttcgatcagtccggattcctcagatcggagacaagttcgccagcagacacgga
cagaaaggaacctgtgggatccagtaccggcaagaggacatgcctttcacctgtgaagga
atcacacctgacatcatcatcaaccctcatgccatcccctccaggatgacagtcggccat
ctgatcgagtgtctgcaggggaaggtttctgcaaacaaaggtgagatcggcgacgccacg
ccgtttaacgatgccgtcaacgtgcagaaagtgtccaacctgctgtcggagtacggatat
cacctgagaggaaatgaggttctgtataacggcttcactgggaggaagctcacgtctcag
atcttcgttggtcccacctactaccagcgtctcaagcacatggtggacgacaagatccac
tccagggcccggggccccgtccagatcctcaacaggcagcccatggaggggcgatcacgt
gatggcggtctgcgttttggggagatggagcgtgactgtcagattgctcacggagcggct
cagttcctcagagagcgtctgtttgaggcgtctgacccgtaccaggttcatgtatgtaac
ctgtgtggactgatggccatcgccaacacacggacgcacacgtatgagtgtcgaggctgc
cgcaacaagacgcagatctctctggtccgcatgccgtatgcctgtaagctgcttttccag
gagctgatgtcgatgagcatcgcccctcgtatgatgacatcatag
DBGET
integrated database retrieval system