Amphiprion ocellaris (clown anemonefish): 111573686
Help
Entry
111573686 CDS
T06018
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce00310
Lysine degradation
aoce00514
Other types of O-glycan biosynthesis
aoce01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111573686 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
111573686 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
aoce01003
]
111573686 (colgalt1a)
Enzymes [BR:
aoce01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
111573686 (colgalt1a)
Glycosyltransferases [BR:
aoce01003
]
O-Glycan biosynthesis
O-linked Gal type
111573686 (colgalt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
111573686
NCBI-ProteinID:
XP_023133736
Ensembl:
ENSAOCG00000004350
LinkDB
All DBs
Position
19:complement(21248062..21255228)
Genome browser
AA seq
606 aa
AA seq
DB search
MLGLAGLLLSLLSCCSPARGYFAEERWSPESPLLAPRILVALICRNSEHSLPYFLGTIER
LNYPKDRMALWVATDHNEDNTTDILRDWLVKVQNLYHYVEWRPKEEPRRYADEDGPKQWT
DLRYEHVMKLRQVALESAREMWADYFMLVDCDNLLTNPDVLWKLMKENKTIIAPMLESRA
AYSNFWCGMTSQGYYKRTPAYIPIRRQMRKGCFAVPMVHSTFLIDLRKEASRQLAFHPPH
PEYSWAFDDIIVFAYSARMADVQMFVCNKETYGYFPVPLRSHSTLQDETDSFLHSLLEVN
VRNAPVMPSKHIRVPRKQPDKLGFDEVFMINLQRRTDRRERMLRTLYEQEIACKVIAAVD
GKAMNVSEVHSMGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIVERRLHTSLVIED
DLRFEVFFKRRLMNLMSEVENEGLDWDLIYIGRKRMQVDHPEKAVPNIHNLVEADYSYWT
LGYMMSLQGAEKLLKAEPLKKILPVDEFLPIMYNKHPVSDYMDQFETRDLKAFSAEPLLV
YPTHYTGDKGYISDTETSTVWDNDKVRTDWDRARSGKTREQAEISSEAQNSDVLQSPLDS
TARDEL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggctggccggcctgctcctctcgctcctgtcctgctgctctcctgctcgggga
tatttcgcggaggagcgctggagccccgagtctcctctcctcgctcctcggatcctggtc
gccctgatttgtagaaactccgagcactccttgccgtatttcctgggtaccatcgagcgc
ctcaactaccccaaagaccgcatggctctgtgggtagctactgatcacaatgaggacaac
actacagacattctgcgggactggcttgtaaaggtgcaaaacctttaccattacgtggag
tggcgaccaaaagaggaacccagacgctacgcagatgaggacggtccgaagcagtggaca
gatctccgctatgagcatgttatgaagcttcggcaagtagcgctggagtctgcccgtgaa
atgtgggcagactactttatgctggtggactgtgataacctcctcaccaatcccgatgtg
ctctggaagctcatgaaagagaacaagactattattgctccaatgcttgagtcccgtgcg
gcctattcaaacttctggtgtggaatgacctcccagggctactataagcggactcctgcc
tacatacctattagaaggcagatgcggaagggctgttttgctgttcccatggtccactcc
acattcctgatagacctcaggaaagaggcatccagacagttggcctttcacccaccacac
ccagaatacagctgggcatttgatgacatcattgtgtttgcatattctgctcggatggca
gatgttcagatgtttgtatgtaacaaggagacctatggttacttccctgtgccattacgc
tcacacagtactttgcaagatgaaaccgacagcttcttgcactccctgttagaagttaac
gtgcgaaatgccccagtgatgccttccaaacacatacgtgttcctagaaaacaacctgac
aaactgggctttgatgaggtgttcatgataaacctgcaaaggcggaccgaccgccgagaa
cgtatgctgcggacattgtacgagcaggagattgcttgtaaagtcattgcagctgtagat
ggaaaagcgatgaacgttagtgaggttcatagcatgggcatccatatgctgcctggctac
agtgacccttatcacggtcgaccgctaacaaaaggagagctgggatgcttcctttctcac
tataacatctggaaagagattgtggagcgccgcctgcacacctctctggtgattgaggac
gacctgcgctttgaggttttcttcaaacgtcgtttgatgaacttgatgagcgaggtggag
aatgaaggactggattgggacctcatttatattggtcggaagagaatgcaagtggatcac
ccagagaaagcagtgccaaatatacataacttagtggaagcagactattcatattggaca
ctaggctatatgatgtcattacagggcgctgagaaacttttgaaagcagaaccactgaag
aagattttgccagtggatgagtttctgcctatcatgtacaataaacaccctgtgtccgat
tatatggatcagtttgaaaccagggacctgaaagcattttctgcagagcctcttcttgtg
tatccaacacactatacaggtgacaagggctacatcagcgacaccgagacctcgactgtg
tgggacaacgacaaagtccgcactgactgggacagagcacgctcaggaaaaactcgagag
caagctgagatcagcagcgaagcccagaactcagatgtgctccagtcccctctggacagt
acagcacgggacgagctataa
DBGET
integrated database retrieval system
