Amphiprion ocellaris (clown anemonefish): 111574008
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Entry
111574008 CDS
T06018
Symbol
arid1aa
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111574008 (arid1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111574008 (arid1aa)
03021 Transcription machinery [BR:
aoce03021
]
111574008 (arid1aa)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111574008 (arid1aa)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Helix-turn-helix
ARID
111574008 (arid1aa)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111574008 (arid1aa)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111574008 (arid1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
111574008
NCBI-ProteinID:
XP_023134151
Ensembl:
ENSAOCG00000019453
UniProt:
A0A3Q1BKE2
LinkDB
All DBs
Position
9:complement(10149019..10168342)
Genome browser
AA seq
2310 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKKPDRDPKEDSAPGEKQSDKKQPGLDSGSPGRGDLQDGADG
GNAGGGGEPEMKNGNGNPPRANNNTQNDSVGPEGNNHPGLVHHHGPAFPPPSYGYSQHYG
RAPFHQHGGQQSPGMAAAAGPVVQSSNMMDPYQPNSHDHGFSNHQFNNYNPFPNRTPYPG
QAYAMNSPRSAQAPTAGGQPAKQQPPAGGPTAMAGSYSNQRYNIGNPQPTSTPTLNKLLT
SPSSTRGYQNYPASDYSSQEGASKGPADMGSSGQYGGSNPGWQQRSHHPSPMSPGSAGQP
LVRNQPPMDPMGKMRGQPYGTGNPYGQQSQQGPPTGPQPGPGYPGQGYGPPGPQRYPVGM
QGRTPGGMGGMPYGPQMGSYGQQGPGGYGSQGQAPYYSQPGQAPHPSQQQTPYSQPPPGQ
PGGQTPYPGQPHPPPTSGPHTQGGPPYQQPHMPPQSQGPLPGPSQGPPQSQPPYSQASAP
QSGQSPYAQQQGPPSQAPQQPSSQATPGSQGQSSYPGSTQGPQQPPSQQQQQQSQSHPQQ
PPGHSQHPQGQPAAYPQNPQQQQAQQSPYQRFPPPQQQEVSQDSFQSNAPPSTQPKSGPE
DGQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTPGVSSSQGEQSNPAQSPFSPHTSPHLP
GIRGPSPSPAGSPASASTPRTGPLSPANMPGTQMPPRPSSVQSDGSLHPAMSQSPMAQDR
GFMQRNPQMPPYGSPQSASALSPRQSSGGQMHPGMAPYPQNNSMGGYGQQGGQYGPQGYP
RQPGYGNMPNANYPGPGMGSMNPMAGQGGGPPYAGMPPGRMPPNQMGARPYGPNMGPNMG
PNMGPNMGPNMPPNMGNMPPQVGSGMCPPPGMNRKPQDPTAIQHPATNSMHNRMPGYPNM
SPGMMGSGPPYGPPMNNMPGMMNTPGGSPYPMGPNMANNTSGMASSPEMNNKMNNKVDGS
GTPKPEPKSKKSNSSTTTSEKITRLYELGPEPDRKVWVDRFLAFIDEKAMGMTNLPAVGR
KPLDLFRLYMSVKEIGGMAQVSKNKKWRDLATSLNVGTSSSAASSLKKQYIQCLYAFECK
IERGEDPPPEIFTDNKKNQPAKVQPPSPASLCSTAGSGSLQGPQTPQSTSSSMAEGGDLK
PPTPASTPHTQMPPMPPGSRSSVNLQDPFSEGSDPAFPRKNMTPNSTYQPGMNTPDMQGR
MGPYEPNKDPFSNMRKVGEQFLPANQGPNSGVGDQQQQQQQQPPQQQQQQQQQPPFNRGP
PGAMGTMPMGPRQQYPYGPGYDRRSEQGMGPEGNMGSGAPQPNPMMPANADTGMYSPNRF
PPQQPRHDSYGNQYPGQGTPPTGSYPNQQPGMYPQQQSYKRPVEGGYPPSKRHEPEYSGP
FPGGQQAPQQQQQQGGASAPSSGQQESYNQYSGSGPYPGSDRRPPGPGNQFPFPFGRERM
QGATGPNAQPNMPPQMMQSGPDGPQGGMWQGPRDMNYQNYPSRQGGPGGPPQGPGYPGMN
RSEEMMSSEQRMNHDGQWGGQMGPRQPPYGPAGPGQPMPRSVQSNYQPPQGVQNHIPQVS
SPASMPRPMESRTSPSKSPYMHGVMKMQKAGPPVPASHIVPPPVQSPLIRRDMPFPPGSI
EATHPVLKPRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSSISTFDL
NTLPGLLELVVEYFRRCLIEIFGILREYEVGDPGQRTLLDPDALKRDWDSTEEEEPRTED
MEQEEEDDEEEEEQETEGPANVKEEEDQVQCSRGKDEKAGHEKEEEKKSKGPNSEQTGLS
QSLSANERPKQASKFDKFPLKVVRKKDPFVAAQTNNHGKLQEFDSGLLHWSAGGGDSTEH
IQTHFEPRKDFLEPRERIPVPPVLLKRRVLEEEIRENCLPTEEDKRKYQDEDERPKETSS
SEKSAVTEKTGSSPGTEEEKKTDSEMKAVEKGSKNHQENNRPIPSSGSIFIQKAQQTGTI
LEDEPHSKDEGPLIALANWQDSLARRCICVSNIVRSLSFVPGNDHEMSKHPGLLLLLGRL
ILLHHRHLERKQAPLTYEKDEDSDEGVGQRDEWWWDCLELLRENTLVTLANISGQLNLSI
YPESICLPLLDGLLHWAVCPSAEAQDPFPTLGPHSALSPQRLVLETLSKLSIQDNNVDLI
LATPPFSRLEKLYGNLVRLIGDRKVAVCREMAVVLLANLAQGDTMAARAIAFQKGSVGNL
LGFLEDSLAATQLQQSQSSLLHLQGMHFEPTSPDMMRRAARALHALAKVEENHSEFTLHE
SRLLDLSVSPLMNSLVSHVICDVLFLIGQS
NT seq
6933 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgccactcttaacactagcccgccttccgaactcaaa
aagccggatcgagaccccaaggaagactcggctccgggggagaagcagtcggacaaaaag
cagccgggcttggacagcggatcgccgggccggggggatctgcaggacggggccgacggt
ggaaatgcagggggaggaggggaacctgagatgaagaacgggaatgggaacccgcccagg
gctaacaataatacccagaatgactctgtcggaccggagggaaataaccaccccggtttg
gtgcatcaccacggccccgcgtttcctccaccttcgtacggatacagtcagcactacggt
cgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcgggt
ccggtcgtgcagtcgagcaacatgatggacccgtatcaacccaattcgcacgaccatggc
ttttccaaccaccagtttaacaactacaacccattcccgaacaggactccctatcccggc
caagcgtacgccatgaactcccctcgcagcgcccaggcgccgacagctggggggcagcca
gctaagcagcagccaccagcgggaggacccacggcgatggctggatcttacagtaaccag
agatataacattggaaaccctcagccaacatccacaccgacactcaacaagctcctaacg
tcccccagctcaacgcggggctaccagaactacccggctagcgactacagtagccaagaa
ggagctagtaagggaccagcagacatgggcagcagcggtcagtacggagggagcaacccg
ggctggcaacaaagaagccatcacccgtcgcccatgagcccgggaagcgccgggcagccg
ctagttagaaaccagccaccaatggacccgatggggaaaatgagaggccagccatatgga
acaggcaatccatacggtcagcagtcacaacaagggcctcctacaggtccacaaccgggt
cctggataccctggccagggttatggcccaccaggcccccagcgatacccagtgggaatg
caaggacgtacccctggaggcatgggtggcatgccgtacggtccacagatgggctcttat
ggacagcagggaccaggaggctatggctctcagggccaagcaccatattacagtcagcca
ggccaggctcctcacccaagtcagcagcaaaccccttactcccagcccccaccgggacaa
cctggtggccagacaccttacccagggcaaccccaccctccgccaacttctggtccacac
acccagggaggaccgccctatcagcagcctcacatgcccccgcagtcccaggggccactg
ccaggcccatcccaagggcccccacagtctcagccaccgtattctcaagcctcagctcct
cagtctggccagtctccctatgcccagcagcagggtcctcccagtcaggccccacagcag
ccaagttcccaggctacccctggatcacagggccaatccagctacccaggttccacacag
gggcctcagcagcccccctcacagcagcagcagcagcagtcacagtctcatccacagcag
ccaccgggacacagccaacacccacaggggcagcctgcagcttacccacagaaccctcag
cagcagcaagcacaacagtcaccttatcagcgctttcctcctccgcaacagcaggaggta
tcccaggactcatttcagtccaacgcccctccatccacacagcctaaatctggccctgag
gacggtcaaggccgcccctccagccttccggacctgtcagggtccatcgatgacctgcct
acaggtacagagggcgccctgagtcctggtgtgagcacgccaggtgtgtcgagcagccag
ggtgagcagagtaaccccgctcagtcgcccttctcgcctcacacgtctccccacctgcca
ggcatccgagggccttcaccttctccagctggctcccccgccagcgccagcacaccccgc
acaggaccgctgtcacccgccaacatgccagggacccagatgcctcccaggccgtcaagt
gtgcagtcagatgggagcctccatcctgcgatgagccagtctcctatggcccaggataga
gggtttatgcagaggaaccctcagatgcccccttacggctccccccagtcggcctctgca
ctgtcgccacgccagtcctctgggggacagatgcatcctgggatggccccatacccacag
aacaactccatggggggctacgggcagcagggaggacagtatggcccccaaggttatccc
cggcaacctggctatggcaacatgcccaatgccaactaccccgggccaggcatgggctcg
atgaaccccatggcaggacagggtggaggaccaccgtatgctggcatgcctccaggaagg
atgcctcctaatcaaatgggggcacgtccttatggccccaacatgggtcccaacatgggc
cccaacatgggtcctaacatgggtccaaacatgcctcctaacatgggcaacatgccacct
caggtaggctctggaatgtgtcctcctccaggaatgaacagaaagccccaggatcccaca
gccattcaacaccctgccaccaactccatgcacaacaggatgcctggttaccccaacatg
tctcctggcatgatgggctctggcccaccgtacggccctcctatgaacaacatgcctgga
atgatgaacactcctggtggatcaccttatccgatggggccaaacatggccaataacaca
agtggtatggcctcgagtccagagatgaacaataagatgaataacaaagtagatggaagt
ggaacgcccaagccagagcctaaatctaagaagtccaactcttccaccacaaccagtgaa
aagataacacgtctgtatgagttaggaccagagccggacagaaaggtgtgggtggatcga
ttcttggccttcattgacgagaaagcaatgggcatgaccaacctcccggctgtaggacgc
aaacccctcgacctcttccggctatatatgtcagttaaagagatcggaggcatggcacag
gtgagtaagaataagaaatggcgtgatttggccacatccctgaatgtgggtacatcgagc
agtgctgccagctctctgaagaaacagtacatccagtgtctgtatgccttcgagtgcaaa
attgagcgtggtgaagaccctcctcctgagatttttacagacaacaagaagaaccaacct
gctaaggtccagcccccatctccagcgtccctctgctccactgctgggtcgggctctctg
caggggcctcagacaccccagtccaccagcagctccatggctgagggtggagacctcaag
cctcccaccccagcctccactcctcacacccaaatgccccccatgccaccgggttccagg
agcagcgttaacctccaggaccctttctctgaaggaagcgaccctgcgttccccaggaag
aacatgacacccaactccacatatcagcccggcatgaacacaccagacatgcaaggtcga
atgggcccctacgaacccaacaaggacccgttcagcaacatgcggaaagttggggagcag
tttctaccagctaaccagggccctaacagcggggtgggggaccagcagcagcagcagcag
cagcagccgcctcaacaacagcagcagcaacagcagcagcctccattcaacagaggaccg
cccggggccatgggcaccatgccaatggggccccgacagcagtacccttatggaccaggc
tacgacaggagatcggaacaagggatgggcccagagggtaacatgggatccggtgctcct
cagccaaaccctatgatgcctgccaacgccgacacggggatgtattcgccaaatcgcttc
ccaccacagcagccacggcatgattcctatggtaatcagtatcctggacagggaacgccc
cctactggctcgtacccaaatcagcaacctggaatgtacccacaacaacagagttacaag
cgtcctgtagaagggggttaccctccatcaaaacgccatgagccggagtacagtggacct
ttccctggtggacaacaagcaccgcaacagcaacaacagcaaggaggcgcctctgcaccc
tcttcagggcagcaggagtcgtacaatcagtacagcggcagtgggccctacccaggctct
gatcgccgtccacctggccccggcaatcagttccccttcccctttggccgtgaacggatg
cagggagcaacagggcccaacgctcagcctaacatgccccctcaaatgatgcagtccggc
cctgacggtcctcagggaggcatgtggcagggacctcgagacatgaactatcagaactac
cccagcagacagggtggccctggaggcccaccacagggacctggttatcctggcatgaac
cgctcagaggagatgatgtcatcagaacagcgcatgaatcacgacggccagtggggaggt
cagatgggccctcgacagcctccctacggtccagccgggcccggccaacccatgcctcga
tcagtccagtccaactaccagccccctcagggtgtccagaaccacattccacaggtgtcc
agcccagcctccatgccccgccccatggagagcaggacatcacccagtaaatccccttat
atgcacggagtaatgaagatgcagaaggctggccccccagtgcctgcatctcacatagtg
ccccctccagtgcagtcgcctctaataaggcgagacatgccttttcccccgggatctata
gaagctacgcatcctgtcctgaaaccacgtcggagactcaccatgaaagatattggaact
ccagaggcctggagagtcatgatgtcattaaagtcaggcttattggctgaaagtacgtgg
gccttagataccatcaatattctcctgtatgatgacagcagtatttctaccttcgatctc
aacacgttgcctggcctactagagttggtggttgagtatttcagacgttgcctcattgaa
atctttggtatcctgcgggagtatgaagtcggggaccctggccagaggacactacttgat
cctgatgccttgaaacgagactgggacagcacggaagaggaagaaccacggacggaggat
atggagcaagaggaggaagatgacgaagaagaggaggaacaagaaactgaggggccagct
aatgtgaaagaggaggaggatcaagtgcagtgctctcggggtaaagatgagaaggcagga
catgagaaggaggaggaaaagaagagcaaaggtcctaattctgaacagacgggtttatcc
cagtccttatctgccaatgagagacctaaacaggccagcaagtttgacaagtttccccta
aaggtggtacgaaagaaagacccatttgtggctgcacagacaaataatcacggcaagctt
caagagtttgacagtgggttacttcactggagtgctggagggggagactcaacagaacac
atccagactcactttgaaccacgcaaagacttcttagaaccgcgagaaagaataccagtg
cccccagttttactgaagcgaagagttctagaagaagaaatacgggaaaattgtttgcct
actgaggaggataaaaggaaatatcaagatgaagacgagaggccaaaagagacttcttcc
tctgagaaatcagcagtcacagagaagaccggctcttcacctggcactgaagaggaaaag
aaaaccgattctgagatgaaggcagttgagaaaggctctaaaaatcaccaggagaacaac
agacccattccttcttccggcagtattttcatccagaaggctcagcagactggcaccatc
ctggaggacgagcctcacagtaaagacgaggggccgctcattgcactggctaactggcag
gattctttagcccggcgctgcatttgtgtctcaaacattgtccgcagcctctccttcgtg
ccaggcaatgaccatgagatgtccaaacatccagggctgctgctgctactggggcgcctc
atcctgctccaccaccggcacctggagcgcaaacaggccccactcacctacgagaaagac
gaggattctgatgagggagtgggccaaagggatgaatggtggtgggactgcttggagctc
ctgagggagaacacattggtcactttggcaaacatttcaggccagctgaacctctccatc
tatcccgagagcatctgcttgcctctgttggatggtcttctccactgggccgtctgcccc
tcagcagaggcccaggaccccttccccaccctgggcccccatagtgctttgtcccctcag
agactggtcctggagacgctaagcaaactgagcatccaagacaacaatgtggacctcatc
ttggccactccgccattcagtcggttggagaagctatacgggaacctggtgcggctaatt
ggagacaggaaggttgcagtctgcagggagatggccgtggtcctactggccaacctggcc
cagggtgatactatggcagcccgagcaatcgcttttcagaagggcagtgtgggcaacttg
ctgggcttcctggaggacagtctggctgccacacagcttcagcagagccagagctctcta
ctacacctacaggggatgcacttcgagcccacaagcccggacatgatgcggcgagctgcc
cgggctctgcacgccttagctaaggtggaggagaaccactcagagttcacactacatgag
tcccgactcctcgacctttcagtgtctcccctaatgaactcgctggtttctcatgttatc
tgtgatgtactctttttgatcggccagtcatga
DBGET
integrated database retrieval system
