Amphiprion ocellaris (clown anemonefish): 111574042
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Entry
111574042 CDS
T06018
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked isoform X3
KO
K16498
protocadherin delta 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111574042 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aoce01009
]
111574042 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111574042 (pcdh11)
Protein phosphatases and associated proteins [BR:
aoce01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111574042 (pcdh11)
Cell adhesion molecules [BR:
aoce04515
]
Cadherins
Protocadherins
111574042 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
DUF6377
Motif
Other DBs
NCBI-GeneID:
111574042
NCBI-ProteinID:
XP_023134198
Ensembl:
ENSAOCG00000018547
LinkDB
All DBs
Position
13:17269426..17398057
Genome browser
AA seq
1043 aa
AA seq
DB search
MDLASQAHVLVILLTCVVLLCRAQERDYTVKEEQPENVRIGNLRKDLDLNLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFTEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPIFKDSELEVTVPENAPMGTSVAQLHATDADLGSNAQIHFAFSNQISASTKRHF
AINSSTGLITVKQPLDREVTPVHKLIVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDADSGHNAEIIYTLGPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTV
IARDNGSTSLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAVITLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSII
ITSRVSPRGLFAIDKTTGNITLQEKIVAADQGLHRLVVKVKDLGQPESLHAIALIHLFVN
DTVSNATFIQEQLRKSMETPLDRNIGDNEVTPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQENRQIKKKKKRKKRSPKSLLLNFVTIDESKPDDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECSCQGGFKTAGQITTRQEMAL
KPPHYGTLCGTGTARSHRIKINL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggacctagcaagtcaggctcatgtgctggtgatattgctcacctgtgtggtcttacta
tgccgggcccaggagagggactacacagtgaaggaggagcagccggagaacgtccgcatc
gggaatctgcgcaaagacctggacctcaacctagaccccaacatcaggttatcctcaccg
ctgcagttcaagcctgtgtacaagacaggtgacgtgcctttggtgagggtggaggcgaac
acgggagagatctttaccaccaatcacagaatcgaccgggagaagctgtgctcaggggtc
ttcactgagaaacgctgctattatgagattgaggtggctgtgctgcccgatgagatcttc
agattggtcaagatccgcttcctgattgaggatgtgaacgacaacgctcccctattccag
tccactgtaataaacatctccatcccagagaacacagccatcaacacccgatacccggtg
ccctcagcgttcgaccctgacgttgggatcaatgggatccaacattatgaactagtcaag
agtgtcagtgagtttggattagacatcattgagactcctgaaggtgacaagtggccacag
ctaatcgttcagcagaatcttgatcgcgaacagaaggacacctttgtcatgaagattaag
gtggaggatggtggcaaccctcccaaatccagcactgccattctccaggtcaccatttct
gatgtcaacgacaatcgtcccatcttcaaggacagcgagcttgaggtcacagtgccagag
aatgccccaatggggacatcggttgctcagcttcatgccacagatgcagacttgggctcc
aacgcacagatccacttcgccttcagcaaccagatctctgcttcaaccaaacgtcacttt
gccatcaacagctctacaggactgatcactgtgaagcagccactggacagggaggtaact
cctgttcataaactcattgtcctggccagtgatggcagctccaccccctccagagccaca
gttactgttaatgtaacagacattaatgacaatgttccctctatagacactcgctacatt
atcaacctggttaatgggactgttcttctgtctgagaatgcacctctcaacaccaaaata
gccctaattaccgttacagacaaggatgcagatctttatggcaaagtagcttgctacact
gatcatgatgttcctttccgattgaagcctgtctttaatgatcagtttttacttgagaca
gctgcccctctagattatgaaacaactcgagaatatgcaattaagatagtggcctcggat
agggggacgcctccgttgaacacttcagctatggtcctaattaaaatcaaggatgagaat
gacaacgcacctatctttccccagccggaaatccaactttctataccggagaacaatgac
ccctctacacagttaataaaaatcagtgccactgatgccgatagtggacataatgctgag
ataatttatactcttggccctgatgctcctgatgggtttaacatagacagacgatcagga
attctttccgttggcaaacgactggacagagagaagcaggagaggtactcattcactgtc
atagcgagggacaatggctctacctccctgcagagcaatgtcactgtcaggctaatcgtc
caggaccttaatgacaacagcccagctttcacacaccctgagtacaacttctatgtgcct
gagaacctacctctctatggaaccgtgggcctaatcacagtgacggacgcagatgcggga
gataatgctgttataaccctctccattttgaatgggaaagacaatttcatcattgacccc
caaactggtgtgatcaaacccaacatcacctttgacagggagcagcaaagctcctataca
tttatggtcaaggcagtcgatggagggcaacctccaagctcctcctacgccaaggtcact
atcaatgtagtcgatgtgaatgacaatcgccctgtgtttgtcatcccatcctcaaattac
tcatatgacctagtgcgaaccaccaccacgcctggtgctgtggtcacaagagtgtttgcc
attgacaatgacacaggtatgaatgctgagctgcagtacagtataatcagcagcatcatc
atcacatctagggtctcccctcgaggtctatttgccatcgacaaaacgacgggtaacata
acactgcaggagaaaatagtggcagctgatcaggggctgcataggctggtagtcaaggtc
aaagatttaggccagcctgagtcattacatgctatcgcactcattcacttgtttgtcaat
gacacagtgtcaaatgctacctttattcaagagcagctgcgaaaaagtatggagacgcca
ctggatcgtaacataggggacaatgaggtaacacctcaagctaatggatatgtgattgtt
gtcatagctatcatagcagggaccatgactgtcatcctggtgatatttgtgactgccttg
gtgcgctgccggcagacacccagacacaaagtagtacagaagggcaaacagagcggagag
tgggtgtcacccaaccaagagaaccgtcagatcaagaagaagaagaagaggaagaagcgg
tcccccaagagcctcctcctgaactttgtgaccattgatgaatccaagcctgacgacccc
acccatgagcatgttaatggcacactggatctccctgtggagctagaggagcaaaccatg
gggaagtacaattgggcgaccacgcccaccaccttcaaacccgacagcccagatttagcc
aagcattacaagtctgcgtcccctcagcccacatttcaaatcaaaccagaaactccagtg
gccccaaagaaacaccatgtgatccaggagctccccttggacaacacgttcgtggtgggc
tgtgactcactctccaagtgctcatcgactagctccgacccatacagtgtctcagagtgc
agctgtcaggggggattcaagactgcggggcaaatcaccacccgacaggagatggcactg
aaaccaccacactatggcacactctgtggcacaggtacagctcgctcccacaggattaaa
atcaatctctag
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integrated database retrieval system
