Amphiprion ocellaris (clown anemonefish): 111574168
Help
Entry
111574168 CDS
T06018
Name
(RefSeq) endoribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111574168
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
111574168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
UBA_N4BP1_C
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
111574168
NCBI-ProteinID:
XP_054864727
Ensembl:
ENSAOCG00000033664
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MWMFSHLYVLLCSFSHGNKEVFSCLGIQLAVNFFLDRGHSDITVFVPSWRKEQPRPDVPI
TDQHILLELEKKKILVFTPSRRCAGKRVVCNDDCFIVKHAFESDGIIVSNDMYRDLQGTK
PEWKRFIEERLLMYSFVNNKFMPPDDPLGRYGPTLENFLRRFPKTQKKQQCPYGKKCTYG
IKCKFHHPERAKQSNRTLADELRENAKNPSAAQKPGPARSSPVPGQSLLQVEDMARNLSL
GSDSSSMKKDQKNKHQAKSGHRQSKRVSTRKEKVNPQSDSVRLGGSQEQLDSGLGSIDSQ
PVEAPWPYSAQQNLRQQFCPPRSSSCSCCSQNHPSHGAAPAFQHHSVGPLGCHGADMLPF
GPPPYGYHGYPVSVPAYSQPADFQHSRVHQQQPFWSDPFAAHPPVCLSHWDPPPPSSLAS
RKQPSSEEREVVRKKLLAIFSAQLVDAAMDMFPQMMDPQKLVAEILMLQSQNRSLR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgttttctcatctctacgtcctgctttgttctttcagtcacgggaataaggaa
gtcttctcctgtctggggatccagctggccgtcaacttcttcctggaccggggccactcc
gacatcaccgtgttcgtcccgtcgtggaggaaggagcagccgcgacccgacgtccccatc
acagatcagcacattctgctggagctggagaagaagaagattctggttttcacgccgtcg
cgacgctgtgcaggaaaacgtgtcgtctgcaacgacgactgcttcattgtgaaacacgcc
ttcgagtcggacggcatcatcgtgtccaacgacatgtaccgagacctgcagggaaccaag
ccggaatggaagcgcttcatcgaggagaggctgctcatgtactccttcgtcaacaacaag
ttcatgcctcctgatgatcctctgggccgatatggaccgaccctggagaactttctgagg
aggtttccaaagactcagaaaaaacagcagtgtccttatgggaagaaatgtacgtacggc
atcaagtgtaagttccaccatcctgaacgagccaaacagtccaaccgcacgttggccgac
gaactccgggagaacgccaagaacccgtcggcggcccagaaaccaggtccggctcgcagc
agtccggtccccggccagagcctgctgcaggtggaggacatggcccgcaacctgagtctg
ggatccgacagcagctctatgaagaaggaccagaagaacaagcaccaggccaagtcgggt
caccgccaaagcaagagggtgtcgacccggaaggagaaggtgaaccctcagagtgactcg
gtccgactcggaggctctcaggagcagctggactcgggtttgggttccatcgacagccag
ccggtggaggccccgtggccgtacagcgctcagcagaacctccggcagcagttctgtcct
ccgagaagctcctcctgcagctgctgctcccagaaccatccctctcatggtgccgcaccg
gccttccagcaccacagcgtcggaccgctgggttgccacggcgccgacatgctgccattc
ggcccgccgccctacggttaccatggatacccggtcagcgtccccgcctacagccagccg
gctgacttccagcacagcagagtccaccagcagcagccattctggtccgacccgttcgcc
gcccatcctccagtctgcctctcgcactgggatcctcctcctccgtcatcgttggcatcg
agaaaacaaccgagcagcgaggagcgggaagttgtccggaagaagctcctggctatcttc
agcgcccagctggtggatgccgccatggacatgttccctcagatgatggatccgcagaag
ctggtggccgagatcctcatgttgcagagtcagaaccgctcgctgagatga
DBGET
integrated database retrieval system
