Amphiprion ocellaris (clown anemonefish): 111574359
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Entry
111574359 CDS
T06018
Symbol
crocc
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aoce03037
]
111574359 (crocc)
Cilium and associated proteins [BR:
aoce03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
111574359 (crocc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
APG6_N
Motif
Other DBs
NCBI-GeneID:
111574359
NCBI-ProteinID:
XP_023134675
Ensembl:
ENSAOCG00000007891
LinkDB
All DBs
Position
Unknown
AA seq
2026 aa
AA seq
DB search
MNVLCSVTTLTLVFHCLSLTYKLKLLIWRLEESVLSEEEKRLTVRGPSPDAPPTCLPARV
REIVTKNLNDSTGAMSSVMSIQEENRVLQGELARLEDLLAHSRADRDELAIKYGAISERL
EQALRFETGDGDLDSPESRSLAQQNVDLRRRLDEEQAAYKRKLTAYQEGQQRQAQLVQKL
QAKVLQYKKRCGDLEQMLQEKSSDLEKHRQDGHSEASNGRHQDEASSNLEDALIRLEEEQ
QRSSSLSAVNAMLREQLEQAGLANEALSQDIRRLTADWTKAREELEQKESDWRREEESFH
SYFSSEHGRLLMLWRQVVGFRRHVCEMKSATERDLSDMRNELARMSHSAQVSCTGLSTTL
YNREGGAALALEREKALRVQLEQQLRDRVSEMMNLQTRTDAERSELNVRLSDSVREGEKL
KGQMEERDREIVTLTRRLEEQSGSDETDMQMMRVHTETLLDTLRDIAQTVLSDGESSSEA
DQDNSGVPLLALIRDSSPRRPSSPTRPSSLFPPPEAALSALRSAVTNKTLQLQDVRGRLL
SAQSSVQQLRKQLSESDLAKRDTEQRNQALQRERDAAHRERETSQREKERLKQERDSLAS
EKVNLEKTVQAAQSSSHILQMDCEKLRLTVASVQRERDHEREEKEAAIQERDRAKAETQR
ITKQWDQSESRASAQRGELSAVRETHQQGEVERQLLEREKVQLTEALARAESSNTELSLL
LNKLQSEDAALRDSLAKMSSMNEGLAQDKTDLNTYILQLEEEKALLQGQKREAEQEKLTV
RDELVRLEQDRLELESTRITLQQSLQDAELSRVGMEAELHSLRTDRLKLQEKVTQLCGEV
TSLGSELSLARGEGQRNEVALEEAGRSRAELARDKAALVVQLTASERENAMLSEELAAFR
SERESLETSLFDVQQQLVQVESRREQLETENQNLRVRSETAAAELRRVRSDRENALAQAE
REKQALTQTLNAAQLEAQQALRKTISEHQEEVERLVSEKEVVRHSLLMEHEVAVRKLRQE
TEDQLHRAKREREELQDELRTLQHDRDQCLLQAEAEKQQALSLKEAEKTVLSDRVSSLQA
ELSAAVLEADRMTREAAHYKEQEQIRVGALTSELLELRSQLEDAASAHERELNSLRETCT
DLRSRTDVALKELEQCRASLSAAEESRDQLRREMLETERRLTHTQDSAESYRREGTELRR
SFCDATKERDTLSQSNTQLRETLRSAETERISVKRQCEEKEQRLAVLEENFSSTQKEVTE
LRSCLREVERSRLEARRELQELRRQLKVLDGEKEQKGREVAELQTRLSLEEQREEERAKE
VFILKQKLTEAETTRDSLKKELSMTQKRLLDSESGWRSCERELTAQLQEARGCEKKLLDE
AKNLSLRTQAAQDVAAQSSLQLSEAQGRLTATEAELVRAEAGRRDLEFRLSSLQSALTRT
LGIGAGGRGIRGRSPGGSSTSAGSMSRHHSISPLRSSLSPPKEFRGSTPENTLGSGGVSP
ERGDTPLPLSQPELDPETLRSGLRDFLQELREAQRERDDVRCQLGAVQRELEELKGERDS
AHSRLTQLQSTLQEYQEGRRGLDERLITTQMLLQQQEEAVRRGDRERRSLSDRVKDLERA
LQASETDKKHTQDLLNKQRAAEMRLEAERRRLREALEAAEARATRVELGRRSLEGELQRL
KLSLGDREAESQASLERHDSLIKQVAEGEARVSLLQREVERLSQALLKAQEGESVLKEKT
TSLNQTLQEAAAAHSGSQSRLAALQKTLSVAEQDKRLLQERMDEARASSAEAKRNMAALT
ERAQNLQIELNQSELRREELEAELNNTQEALRQRSAALLESQRSVQAAQTERAAVEERLR
GLQRAVAMLETEKKDAERQAVRLEKDKNALRNTLDKVERQKLKSEEGSMRLSAEKGRLDR
SLNTAEQELQEAQQQILMLQTQLADMEQSHGVCESLVRQRDEAQREAERLRSSFRDVERT
LGTRERAHRHRVKGLEEQVSTLKDQLQQEMKRRQPSLPSSLLPSGN
NT seq
6081 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtactgtgttcagtcacaacattaacgttagtatttcattgtttatctctgaca
tataagctaaagctacttatctggaggttggaggagagtgttttgtcagaggaggagaag
aggttgacggtgaggggcccttcaccagacgccccccctacatgtctaccagccagagta
cgagaaattgtcacaaagaacctcaacgatagcaccggagccatgtcctcggtcatgtcc
atccaggaggagaaccgggtgctgcagggagaactggcccgtctggaggacctgctggcc
cacagcagagccgaccgagacgagctcgccatcaagtacggggccattagtgagaggctg
gagcaggcgctgcgttttgaaacgggagatggagaccttgattcaccagagtcccgcagc
ttggctcagcagaacgtggatctacgcaggcggctggacgaggagcaagcggcctacaag
cgtaaactcaccgcttaccaggaggggcagcagaggcaggcgcagctcgtgcagaagtta
caggccaaagtgcttcagtacaaaaagaggtgtggagatctggagcagatgctgcaggag
aaatcctctgatttggagaaacacaggcaggatggccacagcgaagcatcaaatgggcgt
catcaagacgaggccagcagcaacctggaggacgctttaatccgtctggaggaagaacaa
cagaggagcagcagtttgtctgcggtgaatgcgatgctgagagagcagttggagcaggcg
ggtttggccaatgaggcactcagccaggacatccgccggctcactgctgattggacaaaa
gccagagaggagctggaacagaaggagtctgactggaggagagaagaagagtcttttcac
agctacttcagcagtgagcacggtcgcctgctgatgctgtggcgacaagtggtcgggttc
aggagacatgtctgtgaaatgaagagcgccactgaaagggacttgtcagatatgcgtaat
gagctggcccggatgtcccactctgctcaggtgtcctgcactggtctgtccactacactg
tacaaccgggagggaggagcagctctggctctggagcgagagaaagctctgagggttcag
ctggagcagcagctcagagatcgagtgtcagagatgatgaaccttcagaccagaacagat
gcagagagaagtgagctcaacgtcaggttgtcagattcggtgcgagagggggagaagctg
aaaggccaaatggaggagagagacagagaaattgtcacgctgacgaggaggcttgaggag
cagagcggcagtgatgagactgacatgcagatgatgagagttcacactgagacgctgctg
gacacactgcgggacatcgctcagaccgttttatcagacggcgagtcgtcatccgaagcg
gatcaggacaactctggtgttccgctgctggcgttgatccgtgactcctcccctcggagg
ccgtcctcgcccactcgaccctcctcgctgtttcctcctccagaggcagctctgtcggct
ctccgctccgccgtcaccaacaagacgctccagctgcaggatgttcgaggtcgtctgctc
tctgcccagtcctcagtacagcagttacgaaagcagctttcggagtctgatttggccaaa
agagacacagagcagcgaaatcaagccctgcagcgagagagagacgctgctcacagggaa
agagagacttcacagagagaaaaggagcgtctgaagcaggagagagactcactggccagt
gagaaggtgaacttggagaagacggttcaggcagcgcagagcagcagccacatcctgcag
atggactgtgagaagcttcggctgactgtggcgtcggtgcagcgagagcgagatcacgag
agggaggagaaggaggcggccattcaggagagagaccgggccaaggcagagactcagagg
ataaccaagcagtgggatcagagcgagagtcgagcctctgctcagcgaggagagttgtct
gcagtgagggagactcaccagcagggggaggtggagaggcagctgctggagcgagagaag
gtccaactgactgaagctctggctcgggctgagagcagcaacactgaactgtctctgctg
ctcaacaagcttcagtctgaggacgcagctcttcgagactctttggcaaagatgagcagc
atgaatgagggtttggcccaggacaaaactgacctcaacacctacatcctccagcttgag
gaggagaaggccctgctgcagggtcagaaacgtgaggcggagcaggagaagctgaccgtc
agagacgagctggtccggttggagcaggaccggctggagctggagtcgactcgcatcacg
ctgcaacaatcactgcaggacgctgagctgagccgggtggggatggaggcagagctgcac
agtctcaggactgacagacttaagctgcaggagaaagtaacccagctctgtggcgaggtg
acctctctgggttcagagttgagtctcgccagaggagagggccagaggaacgaggtggct
ttagaggaggccggccgcagtcgggctgaactggcccgagacaaagcagctcttgtggtc
cagctgacggcatctgagagagaaaacgccatgctgtcagaggaactggctgctttcagg
tcagagcgggagtccctggaaaccagcctgttcgatgtgcagcagcagcttgttcaggtg
gagtctcgcagagagcagctggaaacagagaaccaaaaccttcgagtccgcagtgagacg
gctgcagctgagctgcggcgtgttcgctcagatagggagaatgctttggctcaggctgag
agggagaaacaggctctgactcagactctaaatgctgcacagctggaggcccagcaggct
ttacgcaagaccatctctgagcatcaggaagaggtggagaggctggtctcagaaaaggaa
gtagtacgacacagcttgctgatggagcatgaggttgctgtgaggaagctcaggcaggag
acggaggatcagctccacagagcgaagagagaacgagaggagctgcaggatgaactgagg
actctgcagcatgacagagatcagtgtctgctgcaggccgaggccgagaaacaacaggcc
ctctctctgaaggaggcagagaagacggttctgtctgacagagtgtccagtctgcaggcc
gagctgtcagctgctgtgctggaggccgaccggatgaccagagaagctgctcattacaaa
gagcaggagcagatcagagttggagctctgaccagcgagctgctggagcttcgctctcag
ctggaggatgccgcctccgctcacgagcgagaactaaacagtctacgagagacttgtact
gatcttcggtcacgcactgatgttgctctcaaagagctggagcagtgcagagcttctctc
tcagctgctgaggagagtcgagaccagttgaggcgggagatgctggagactgaacgtcgt
ctgacccacactcaggactcagcagagagctatagaagagagggaacagagctccgtcgc
agcttctgtgatgccaccaaagagagagacactctgagccaatccaacactcagctgagg
gaaactctgcgaagtgcagaaacggagagaatcagtgtgaaacgacagtgtgaggagaag
gagcagaggctggcagtgctggaggagaatttttcttccactcagaaggaggtgacggag
ctgcgcagctgcctgagagaagtcgaaaggtctcgacttgaggctcggcgagaactgcag
gaactccgcaggcagctgaaggttctggatggagagaaggagcagaaagggagggaggtg
gcagagctgcagactcgcctctcgctggaggagcaaagagaggaagagagagcgaaggag
gttttcatcctcaagcagaagctaaccgaagcggaaacaacaagagactccctcaagaaa
gagctttctatgactcaaaagcgtctgctggactctgagtccggctggcgcagctgtgag
agggaactgaccgctcagctgcaggaggctcgtggctgcgagaagaagctcctggatgaa
gccaagaacctgtcgctgcgcactcaggcagcccaggacgttgctgctcagtccagcctg
cagctgagcgaggcgcagggccgactgaccgccaccgaggccgagctggtccgggccgag
gcggggaggagggacctggagtttcgtctgagcagcctccagtcggcgctgacccgaact
ctgggcatcggagcgggagggagaggaatcagggggaggagcccaggaggaagctctaca
tcagccggcagcatgtcgcgccaccacagcatctccccgctgcgctcctcgctgtcacct
cctaaagagttccgaggaagcacccctgaaaacactctgggttcaggaggtgtttctcct
gagagaggcgacacaccgctgcctctctctcagccggagctcgaccccgagaccctgaga
agtggcctgagggatttcctccaggagctgcgggaagcacagagagagagggacgatgtg
cgatgccagctgggggccgtgcagagagagctggaggagctgaagggggaacgagactct
gctcacagtcgactaactcagctgcaaagcaccttacaggagtaccaagaagggaggcgt
ggactggacgagcgtctgatcaccactcagatgctgctgcagcagcaggaggaggcggtg
aggagaggagacagagagaggagatctctgtccgacagggtgaaggatttagagcgagcg
ctgcaggcgtctgagacggataagaaacacacacaggatctgttaaataagcagcgcgct
gctgagatgcgtctggaggcggagaggaggcgtctgcgggaggcgctggaggcagccgaa
gctcgagccaccagggtggagctggggaggcgcagcctggagggggagctgcagagactc
aaactgagcctgggagaccgagaggctgagagtcaggcctccctggagcgccacgactct
ctcatcaaacaggtggcggaaggagaagcccgtgtgtctctgctgcagagggaggtggag
aggctgagtcaggctctgctcaaagctcaggaaggtgaatctgtactcaaagaaaagacc
acttctctgaatcagactctccaggaggcagcggctgctcacagcggctcccagagtcgt
ctggctgctctgcaaaagacactaagtgtagctgaacaggacaaaaggcttctgcaggaa
cgaatggatgaagctcgggcatcatcagctgaggctaaaagaaacatggccgccctcacg
gagcgggcgcagaacctgcagattgaactgaaccagagcgaactgcggcgagaagaactg
gaggccgagctcaacaacactcaggaggctctgcgtcagcgttcagccgctctgttggag
tctcagcgcagcgtccaggcagctcagacggagcgggcagctgtggaggagagactgcga
gggctgcagagagccgtcgccatgctggagacggagaagaaggatgctgagaggcaggcg
gtgaggctggagaaggacaagaacgcactgaggaacacactggacaaggttgagcgtcag
aagctgaagtctgaagaaggcagcatgcgtctgtctgcagagaaaggtcggctggatcgt
tctctaaacacagcagagcaggagctgcaggaggcgcagcagcagattctgatgctgcag
actcagctggctgacatggagcagtctcacggtgtgtgtgagagtttggtgcggcagcgt
gacgaagcccagcgggaggccgagaggctgaggagcagcttcagggacgttgagcgaacg
ctgggaacccgagagcgagctcaccgccaccgagttaaaggcctggaggagcaggtgtcc
accctgaaggatcagctgcagcaggagatgaagcgtcggcagccttctcttccatcctcc
ttactgccgtcaggaaactga
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integrated database retrieval system
