Amphiprion ocellaris (clown anemonefish): 111574551
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Entry
111574551 CDS
T06018
Name
(RefSeq) interphotoreceptor matrix proteoglycan 1-like isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aoce00536
]
111574551
Glycosaminoglycan binding proteins [BR:
aoce00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
111574551
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
Motif
Other DBs
NCBI-GeneID:
111574551
NCBI-ProteinID:
XP_054871699
Ensembl:
ENSAOCG00000014145
ENSAOCG00000034145
LinkDB
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Position
12:complement(6765424..6923598)
Genome browser
AA seq
1710 aa
AA seq
DB search
MMLWPFGLVLLFVVAPQAAGIKGGGVGQDLGLNTEAVGPVRLAELLKTSTNTKGSGLELE
RRRSKRSVFLHSGVRICPQETIKQVLASHQAYYQLRVCQEAVWEAFRIFFDRIPGTAEYQ
RWVHTCQHESLCISDIAKNFSSAEEHVSMIHKRMSRLRDARPPSRGVAPPAPTQKLPEIA
GPEVQTVAPSAAPAIVTSAAILSPTSASTSPALHLTQPAEELEEDSELPNVVPENPVEQI
VEFSIDLVDPGYRELLGDSDSPQYIDLAHHLQDQMLHVFDKLPGFKAIHVLGISKTQDID
GPGGISVHYSLVFEINSPQINSENSEMATGAPESTDDSGLREMVTKALREDASLPIDLDS
LNFEPETILLPALTLTSSVQLVNESSESSEPDSHNEFEVLTDEPEVDKPLLVVPLTPLEK
ENALVTLLDPMTVPDEEVTAVTGGIIESSDQPPATEDITDESESVYDSEAEPSNEEEEEE
LLIITHEIETIHHDETGELVRDYIPTPPVILELETDAPYISLSPNLIPEDDLTLIDEGRE
NPSLDVVQVTPTTQILFTPAGDELSDSGLPITTLSAITGQPHTEPAANPQEDEEVNALPD
EEDVDLGVPESHDPDDVLKTESVSEFETEVKLLEAEEESVTETDDNLLEVLHPTPDQIEV
FEPEVEAIQISEQDEDGAEVSESDKEVAPVSEPETEVTDVSEPDVGEISDSDKEAAAVSE
PETQVTDVSEPDVGEISDSDKEAAAVSELETEVAEVSEVDVAEVSELDKEVAEVSESKKE
VVEVPEPDKEVVKVSEPDIEVAEVSEPDTEAAEVSKPDKEVAEVVEPEEDSAVETHEEIA
VSEPAEIIVNVPGIEEKELEISEPLEVSEPEESEADAEPDDSAVEVLTEGGVEERANILQ
SEEDIGEFTEEVEKAQETEEGEVEVTLPAPEPEKDAVEVSERAPELEEESEPALDVDEEV
LEPEKEVVKAAASEEPVLEVSETEATEEDVVKSVVEEEAVKIPAPEDELAEKETEVVEVL
KIVEEVVQAPGPSDGIVDLLEPEPESVPEEESHVIEVIETGAEEVGTHESEEVQEGVSEP
SENMVEVVKLASEPESEKEPEVVSDITEITKLEIEVADDVKPEEEVVVPVLDEEPADVSE
PHLPPEAEEDVVESPEPEDASEEDKSTVDILPPVEQVPEVSEPSKEEVAVPQSEGEGVDV
PESHPEEVIIEILEPEKDITEPPAESIKILHPLDDMEDLHFGEDAIHVVEDNEFLHPVGS
DYHHPSEDSNLPIIPIDTEPSREDAGEPDQEYPIIDDFHMEEDVDSVDAQVESDTADVMM
TDVTAPDKQDKSEGTKVTEDLLEETQESDSSPKRDISVTAAPVPDSFPTPPAAPVDLSEV
SSPNPTVDSGLFEVAEQSVIPSSAESSEDDSTEPEAELEHSEPAVVIIDEDLEGAVKKGG
ESHTSPPAATEEVIDEAVQDLAVELDQTDMPATEANELPDEGSGFLSVEAEHSTVSVTAP
PPVRYLTTPAMTTASHGRELVVFFSLRVTNLDFSEDLFNKTSPEYRSLENTFLDVLLPFL
QANLTGFKKLEILNFRKGSVVVNSKMKFAKSVPYNITEAVHCVLEEFCSAASKNLHIQID
THSLDVEPADQADPCKFLACDEFSRCVVNGRTKEAQCLCEPGFLSVDGLPCQSLCVLQPD
YCQGGECHIVPGHGAVCRHRNGYSLPGLAS
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgatgctttggccatttggacttgtgctgctgtttgtcgtcgctccacaagctgccgga
attaaagggggcggcgttgggcaggacttggggttgaacacggaggctgttggtcctgtg
cgcttggcggagctgctgaagacgtccacaaacaccaaaggttcagggctggaacttgaa
cggcgtcgatccaagaggtcggttttcctgcactcaggagtcagaatctgcccccaagag
accatcaagcaagtcctcgccagccaccaggcttactaccagctccgagtttgtcaggag
gctgtgtgggaggcgttcaggatcttctttgacaggatccctgggacggccgagtaccag
agatgggttcacacgtgtcaacacgagtcgctctgtatctcagacatcgccaaaaacttt
agcagcgctgaggagcacgtgagcatgattcacaagaggatgagcaggcttagagatgcg
aggcctccatcaagaggagtagcgcctcctgcaccgacacagaagctccctgagatagca
ggtccggaggttcaaaccgttgccccatctgcagccccagcaattgtcaccagcgctgcc
atcctcagccccacgagtgcctctacaagccctgccctccatctgactcagcctgctgag
gagctcgaagaggactcggagcttcccaacgtcgtccctgagaatccggtggagcagatc
gttgagttcagtatcgacctggtggatccgggttacagagagctgctgggtgactcagac
tcccctcagtacatcgacctggctcaccacctgcaagaccagatgctgcatgtttttgac
aaacttccaggatttaaagccattcatgtgctgggaatcagcaagacccaggacattgac
gggcccggaggaatctcagtgcactactctttggtctttgagattaattcccctcaaatc
aactctgagaattcagagatggcgactggtgcacccgagtccacggacgactctggactc
agggaaatggtgaccaaggctttacgtgaggacgcctctctgccaattgatctggactca
cttaactttgaaccagaaacaatcctcctgccagcactgacactgacctcttcagtacaa
ctagtgaatgagtctagtgagtccagtgagcctgattcacataatgagtttgaagttctc
acggatgaaccagaagtcgataaacctctgctggtagttcccttgaccccactggagaag
gaaaatgctctggtgactctgcttgatcccatgactgtcccagatgaagaggtaacggct
gtaactggtgggattatagagagcagtgatcaacccccagccaccgaggacattactgat
gagtcagagtcagtttatgacagtgaggccgagccatcaaacgaagaagaggaggaagaa
ctgctgatcattacacatgagattgaaaccattcatcacgacgaaaccggtgaacttgtg
cgcgactacataccgacccctcctgtgattcttgagctggagacagatgctccatatatc
agtctgtctcccaacttgataccagaagatgacctgacacttattgatgagggcagagaa
aatcctagcttggatgttgtgcaggttacccctaccactcaaattttattcactcctgct
ggagacgaactgtctgattctggactccccatcacaacactatcagccatcacaggccag
ccacacacagagccagcagccaaccctcaagaagacgaagaagttaatgcccttccagat
gaagaggatgtagacttgggtgtccctgaatcccatgatcctgatgatgttttgaaaact
gagagtgtttcagaattcgaaactgaagttaaactgcttgaggcagaagaagaatcagtt
actgaaactgatgataacttgcttgaggttttgcatccaacacctgaccaaattgaagtt
tttgaaccagaggtagaagcaattcaaatttcagagcaagatgaagatggagctgaagtt
tcagaatcagacaaagaagtagctccagtttcagagccagaaacagaagtcactgatgtt
tcagagccagatgtaggtgaaatttcagattcagacaaagaagcagctgcagtttcagaa
ccagaaacacaagtaactgatgtttcagagccagatgtaggtgaaatttcagattcagac
aaagaggcagctgcagtttcagaactagaaacagaagtagctgaagtttcagaagtggac
gtagctgaagtttctgagctggataaagaagtagcagaagtttccgagtcgaaaaaagaa
gtagttgaagttccagaaccggacaaagaagtggtcaaagtttcagaaccggacatagaa
gtagctgaagtttctgaaccagacacagaagcagctgaagtttcaaagccggacaaagaa
gtagctgaagttgtagagccagaggaagattcagctgtagaaactcatgaagagattgca
gtttcagagccagcagaaatcatagttaatgttccaggaatagaggagaaggagcttgaa
atttctgaaccacttgaagtttcagagccagaagaatcagaagcagatgcagaaccagat
gatagtgcagttgaggttttgacagaaggaggagtggaagaaagagccaacattttgcaa
tcagaagaggacataggtgaatttacagaggaggtagaaaaggctcaagaaacagaagaa
ggtgaagttgaggtgacacttccagctccagagcctgagaaagatgcggtggaggtttca
gaacgggctccagaactggaggaagagtcagaacctgctttagatgtcgatgaggaagtt
ctagagccagagaaagaggtggttaaagctgcggcatcagaggaaccagtactggaagtt
tctgagacagaggccactgaggaagatgtggtgaaatcagtggtagaagaagaggcggtt
aagattccagcaccagaggatgaacttgctgaaaaagagacagaagtggtggaggttttg
aaaatagtagaagaagttgttcaagctccaggaccaagtgatggtatagtagacttattg
gaaccagaaccagagtctgtaccagaagaggaaagccatgtaattgaagtgatagaaaca
ggagctgaggaagttggtactcatgaatcagaagaagtgcaagaaggagtttcagaacca
agtgaaaacatggtagaggttgtaaagctagcttcagaaccagaatcagagaaagaacca
gaagtagtgtcagatataactgaaataacaaaactggagatagaggttgctgatgatgtg
aaaccagaagaagaagttgtggtcccagtattagatgaggaaccagcggacgtttcagaa
ccgcaccttcctcctgaagctgaggaggacgtagtggagagtccagaaccagaagatgca
tcagaagaagacaaaagcacagttgatattttacctccagtagaacaggtacctgaggtt
tcagaaccatcaaaagaggaggtagcagttccgcaatcagaaggcgaaggtgttgatgtc
ccagaatcacatccagaggaggtgataattgagattttagagcctgagaaagacattact
gagccaccagctgaatcaataaaaatccttcaccccttggatgacatggaagaccttcac
tttggagaggatgctattcatgttgttgaagataacgagttccttcatcctgtaggatct
gactatcatcacccatcagaagacagtaatttaccaatcataccaatagacaccgagcct
tccagagaagatgcaggtgaacctgatcaggaatatcccatcatcgatgattttcacatg
gaggaggatgttgacagcgtagacgctcaggtggagagtgacaccgctgacgtcatgatg
acagacgtgacagctccagacaagcaagacaaatcagagggcacaaaagtcacagaagat
ttgctggaggagacgcaggaaagtgattcatccccaaaaagagacatcagtgtgacggct
gcaccagtcccagactccttccccacacctccagcagctcctgtcgatctgtctgaagtg
tcctcacctaacccgactgtagactctggactctttgaggtagcagagcaatctgtaatc
ccctcttctgctgagtcttcagaggatgatagcactgagccggaggctgagttggagcac
agtgagccagctgtcgtcattattgatgaagacttggaaggggcagtgaagaaaggaggc
gaaagccacaccagtccgccagctgccactgaggaagtcattgatgaggccgtacaggac
ctggctgtggagctggatcaaacagacatgccagccacagaggcaaacgagcttcctgat
gaggggagtggtttcctatctgtggaggcagaacacagcactgtcagtgtcacagccccg
cctccagtgagatatctgaccacgcctgccatgaccacggccagccacggccgggagctg
gtggtgttcttcagcctgcgtgtcaccaacctggacttttctgaggaccttttcaacaag
acgtcacctgagtacagatcgctggagaacaccttcttagatgtgctgctgccgttcctg
caggcaaacctaacaggcttcaagaaactggagatccttaacttcaggaagggcagtgtg
gtcgtcaacagcaagatgaaatttgccaagtcggtgccgtacaacatcactgaggccgtc
cactgtgtcctggaggagttctgctctgctgcctccaagaacctacacatccagatagac
actcactctctggatgttgaaccagccgatcaggcggatccctgcaagtttctggcttgc
gatgagttttctcgctgtgtggtgaacggccggacgaaggaggctcagtgtctgtgcgag
ccgggcttcctgtcagtggacggcctgccctgccagagtctgtgtgtcctacagccagac
tactgccaaggaggggaatgtcacatagttcccggacatggagctgtgtgcagacacaga
aacggctatagcctcccaggcctggccagttaa
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integrated database retrieval system
