Amphiprion ocellaris (clown anemonefish): 111574739
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Entry
111574739 CDS
T06018
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04140
Autophagy - animal
aoce04148
Efferocytosis
aoce05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111574739 (vps18)
04148 Efferocytosis
111574739 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111574739 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111574739 (vps18)
Membrane trafficking [BR:
aoce04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111574739 (vps18)
Hops complex
111574739 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_11
zf_RING_Vps8
zf-RING_2
zf-RING_Vps41
DUF5600
zf-RING_UBOX
Apolipoprotein
DUF1664
zf-ANAPC11
zf-RING_5
DUF2175
zf-rbx1
DUF4446
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
111574739
NCBI-ProteinID:
XP_023135259
Ensembl:
ENSAOCG00000008401
LinkDB
All DBs
Position
12:28835100..28847815
Genome browser
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNIRQSSQQHSRLSGTNIGITHSGFVNVRLEEEKPIFNKQRIDFTPPEK
INHLAVCNNHLCMSLGKDTLLRIDLAKPDQPNQTELGRKDDSKVHRLFLDPTGSHLLISL
NTSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGNETSTGPILVGTSQGIIFEAEISA
SEGSLFNTNPDQYFRQVHSLEEDGKPAPVCCLEIERGLENKYFIIATTRKRLFQFVGKVA
EGSEQQGFSSIFNQNQDLLPSFQEFPANMGYSEITFYTSKLRTSPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWEYTPDIDLSLNKPISIVLTQFHFLLLLHDRVKAICTLNGQVVYE
DVFPDKFGTLKRMIKDPAGGLVWIYTERAVFRYHIQREARDVWQMYMSMNKFDLAKEYCR
DRPECMDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKK
LNNLKQSERTQITLLVTWLTELYLNRLGQLESDGNSIIFQETRDEFRQFMSSSKHKECLY
NNRTTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDDYSAALDVLAKHCDEKLFYK
FSPVLMQHIPKNVVDAWIQMGKRLDPKKLIPALMNYSQMGSTQQISETIRYMEFCVYELN
VMEEAIHNYLLSLYAKYRSDSLLLYLEQAGTHASEIHYDLKYALRLCAEHGYLRACVLVY
RIMELYEEAVDLALQVDVDLAKTCADLPEDDEEMRKKLWLKIARHVVQEEKDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIEELKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLSAYRQNRLEE
LQKKLAATTQSSKSRHRPVPKDEGDTSSLGKGNAGTSREQIKSDIDDIIASECVYCGELM
IKSIDKPFIDPQKFEEEKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaattctggatgagtatgaagactcgcagaacatcaggcagagctcgcagcag
cacagccgcctgtcaggtaccaacatcgggataacgcattcaggcttcgtgaatgtgaga
ctcgaggaagagaagccgatattcaacaagcagaggatcgattttacgcctccggagaag
attaatcatctggctgtctgcaacaatcatctgtgcatgagtctgggaaaagacactctg
ctgaggattgacttggccaaaccagatcaacccaaccagactgaattaggaaggaaagat
gacagcaaagtgcaccgattgttcttggacccaacaggctcccatctgctgatcagcctg
aacaccagcgagtgtttgtacctgaacagaaacacccagaaggttcgcagtctgtcccgc
tggagaggccacctcatcgagagtgtgggctggaacaagctgctgggtaacgagaccagc
accggccccatcctggtgggaaccagccagggcatcatcttcgaggccgagatctctgcc
agcgagggcagcttgttcaacaccaacccagatcagtacttcagacaggtccactctctg
gaggaggacggtaaacctgcaccagtctgctgcctggagatcgagcgaggcctggagaac
aagtacttcatcatcgccaccacccgcaaacgcctcttccagtttgtggggaaggtggcc
gaggggtcggagcaacagggcttcagctccatcttcaaccagaaccaggacctgctgccc
agcttccaggagtttccagccaacatgggatatagcgagatcaccttctatacctccaag
cttcggacctcccccaaggccttcgcctggatgatgggtaatggagttctttatgggcag
ctggactacgtcaggcctgattcgctgctgagtgacgtgcaggtgtgggagtacactcca
gatattgacctcagcctcaacaagcccatctccattgtgctgacccagttccacttcctg
ctcctgcttcatgaccgagtaaaggccatctgcactctgaacggacaggtggtttatgag
gacgtattcccagataaatttggcaccctcaagaggatgatcaaagatccagctggtggg
ttggtgtggatctacactgagcgggcagttttcagataccacatccagcgcgaggccaga
gacgtctggcagatgtacatgagcatgaataaatttgatctggccaaagagtactgccgc
gatcggcctgagtgcatggacatggtgcttgccaaggaggctgagcactgcttccagaac
aagagatacctggagagcgccaagtgctatgctctgacacagaactatttcgaagagata
gcgctcaagttcatcgaagccaaacaagaggaggccctgaaggaattcttactgaagaaa
ctgaataacctgaagcagagtgaaagaacacagatcaccttgctggtcacctggctaaca
gaactctatttgaaccgcctcggccagctggagagcgacggcaacagtatcatcttccag
gaaacccgcgacgagttccggcagttcatgagcagctccaagcacaaggagtgtctgtac
aacaaccgcaccaccatctacgacctgctggccagccacggcaacgtggacgacatggtt
tacttctcggtcgtcatgcaggactacgagagagtgatttcccactactgccagcatgat
gactacagcgccgctctggatgtgctcgccaagcactgtgacgagaagcttttttacaag
ttctcacccgtcctcatgcagcacatccccaaaaacgtggtggacgcgtggattcagatg
ggcaagaggctggacccgaagaagctcatcccagctctgatgaactacagccagatgggc
agcacacagcagatcagcgaaaccatccgctacatggagttctgcgtctatgagctgaac
gtgatggaggaggcgatacacaactacctgctgtcgctttatgcaaagtacaggtcggac
tctctgcttttgtatctggaacaggcaggaacacacgcctcagagattcactatgacctg
aagtacgccctcaggctgtgtgcagagcatggctacctgagggcctgtgtgctggtttat
aggattatggagttgtatgaagaagcagtggatctggccttacaagtggatgtagacttg
gcaaagacgtgcgctgaccttcctgaggatgacgaggagatgaggaaaaagctttggctg
aagatcgctaggcacgtggtgcaggaggagaaagatgtgaagaaagccatgaactgtctg
tccagctgcaacctgctcaagatcgaagacatcctgcctttttttccagactttgtcacc
atcgaccactttaaggaggccatctgcagctcactggaagaatacaaccaacacattgaa
gagctgaaacaagaaatggaggaggcaacagaaagtgccaaacgtatcagagaagacatc
caggaaatgaggaacaagtacggtgtggtggattcccaagaaaaatgtgccgcttgtgac
tttccgttgctcaacaggccgttctatctgttcctgtgtggtcacatgttccactacgac
tgcctgttccaggaggtgacccctcacctgtcagcctacaggcagaaccgtctggaagag
ctgcagaaaaaactggctgcaaccacgcagtcgtccaaatcacgccaccgtccggtgccg
aaagatgaaggagacacttccagcctgggaaaaggcaatgccggcacgagccgcgagcag
ataaaatcagacattgatgacatcattgcgtccgagtgcgtttactgcggtgaactcatg
atcaaatccattgacaagcctttcattgatccgcagaagttcgaggaggagaaatccagc
tggctgtga
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