Amphiprion ocellaris (clown anemonefish): 111574919
Help
Entry
111574919 CDS
T06018
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111574919 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aoce04990
]
111574919 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
aoce04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
111574919 (pdlim5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
111574919
NCBI-ProteinID:
XP_023135504
Ensembl:
ENSAOCG00000002923
UniProt:
A0A3Q1BX97
LinkDB
All DBs
Position
17:8014220..8054214
Genome browser
AA seq
609 aa
AA seq
DB search
MSSNYSVTLPGPGPWGFRLQGGKDFCLPLTISRLTDGGKAAKAKISVGDIILSIDGVSTE
SMNHLEAQNKIKACTDHLSLTLQRPPAAPKDGVPKDEPQEIIKPVPITHPAPSTAYTKPL
SQPNPAYNKTARPFGGDSGGVTASSSPAAPKVASIPSESSAFTPAAPSQPPQPPFLLKSS
LPASNSAIKPGPGRSAFTSPSASSSSSNSSSPARMTAPSSHPNVPQPSVYNTPINLYSND
NACEVAMGQRRGLLESQGLSEHINGKPGMEPENNASPLNDASKKRLIEDTEDWHPRTGTG
QSRSFRILAQLTGTENEQIPENSGKNESLDKTTPTVYTSAAAKPFAKPAAAPRNGSVAPA
STFQSPPAPNKAASQPGFPSGLLKGGVGPSFGKVASPASRGPDRPTPQPHPEDLNSLVQR
AEHIPAGTRTPMCNKCNNVIRGPFLVAMGMSWHPEEFNCAHCHSSLADRGFVEEKGQVYC
ERCYEQFFAPTCGRCQQKILGEVMNALKQTWHVSCFVCVACQQPIRGNMFHMEDGQPYCE
KDYYNLFGTNCHGCDFPIEAGDQFLEALGFTWHDTCFVCAVCSTNLEGQAFFSKKDKPLC
KKHAHTVNI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaactacagtgtcaccctgcctggccctggcccctggggcttcagactgcaa
ggaggaaaggacttctgtctgcccctcaccatctcacggctgactgatggaggaaaggca
gccaaagccaagattagtgttggagacatcattttgtctattgatggcgtttccacagag
agcatgaatcacctagaggcccagaacaagataaaggcctgcacagaccatctcagtctc
actctgcagagacctccagctgcccctaaagatggagtgcccaaggatgaacctcaggaa
atcattaagcctgtgccaatcactcaccccgccccgagcaccgcatacacaaagccactc
agtcagcccaatcctgcatacaacaagacagctcggccttttgggggcgacagcggtggg
gttacggcttcttcctccccggctgctcccaaagtcgcctctattccttctgagtcatct
gcttttacaccagctgccccctctcaaccaccgcagcctccgtttctgctgaagtcgagc
ctacctgcctcaaactcggctatcaaacccggccccggtcgctccgccttcacctcccca
tctgcctcatcctcctcctctaactcctcctctccagccagaatgacagccccctcatcc
caccctaatgtcccacagccctccgtctataacacacccatcaacctgtactccaatgac
aatgcttgtgaggtggctatggggcagaggcgaggtctgttggagagccagggcctgtca
gagcacatcaacgggaagcctggtatggagcctgagaataatgcatctccactgaacgat
gccagcaagaagcgtctgattgaggacacggaggactggcatcctcgaacaggaaccggc
cagtcccgctccttccggattctggcccagctgaccggcactgagaacgagcaaattcca
gagaacagtggaaagaatgaatcacttgacaaaaccacccccactgtgtacacatcggct
gcagcgaaaccatttgccaaacctgcagcagcacccaggaacggcagcgtcgcccctgct
tccacatttcagagccctccagcccccaacaaagccgcctcccagcctggatttccatca
ggtcttctcaagggtggagtaggcccctcctttggtaaagttgccagtcctgcttccaga
ggcccagaccgccccactcctcagccacatccagaggacctcaactctctggtgcagcga
gctgagcacatcccagctggtactcgcaccccgatgtgcaacaagtgcaacaatgtcatc
aggggcccattcctcgtggccatgggcatgtcatggcaccccgaggaattcaactgtgct
cactgccactcctctctggcagaccgtggatttgtggaagagaagggccaggtgtactgc
gagcgttgctacgagcagttcttcgctcccacctgcggccgctgccagcagaagattctt
ggggaagtcatgaatgccctgaaacagacctggcacgtgtcctgtttcgtctgcgtagcc
tgccagcagccaatcagaggcaacatgttccacatggaggatggacagccatactgtgaa
aaagactactacaacctgtttgggaccaactgccacggctgcgacttccccatcgaggca
ggggatcagttcctggaggctctgggattcacctggcatgacacctgttttgtgtgtgcg
gtctgctctactaacctggaaggtcaggcattcttctccaaaaaagacaagcctttgtgc
aagaaacatgcccacactgtcaacatctga
DBGET
integrated database retrieval system
