KEGG   Amphiprion ocellaris (clown anemonefish): 111574941
Entry
111574941         CDS       T06018                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aoce03009]
    111574941 (rrp9)
Ribosome biogenesis [BR:aoce03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    111574941 (rrp9)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_EML EIF3I WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 CFAP251_N WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd DSE1_N WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR75_1st ASA1 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_DCAF12 PAC11 Beta-prop_WDR19_1st PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_NWD2_C Beta-prop_ACSF4 WDR54 WD40_like
Other DBs
NCBI-GeneID: 111574941
NCBI-ProteinID: XP_023135547
Ensembl: ENSAOCG00000002891
UniProt: A0AAQ5Z9B0
LinkDB
Position
5:29747174..29752914
AA seq 485 aa
MSSSFFIKGKENPKLGKKGKNTAVTKRKGDGDPAGKGKVRAKKPNKYNEEISSESETESP
AVPKKRQSNEEHVYEETPQEKKLRLAKLYLEQLKDEEEKRAEEDSFETDLIAGRLQEEVL
EQKGKLQRLIAKDLIPPDASEIRVLRGHKLPITCLVIAPDDKCIFSAAKDCSIIKWDVES
GKKLHTIPGGRKGTEDRHVGHTAHILCMAISSDGKYLATGDMNKLIMIWEAATCKHLYKF
TGHKGPVSGLSFRKGTHDLYSASHDRSVKVWNVDENAYVETLFGHQDAITGLDSLSRERC
VTAGGRDRTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKKP
LSTVKLAHGCHGDAGLEQPHWVASVAALQNSDTVASGASGCSHNSQVNVWKCGQNYRGLE
PLFSVPVSGFVNSLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNGIYVIPLKRKPSNPEE
AKVTE
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgtcttcgtcatttttcataaaggggaaagaaaaccccaaattagggaaaaaagggaaa
aacacagcggtgacgaaacgtaagggtgatggggatccagctggaaagggtaaagtacga
gcaaagaaacccaataaatacaacgaagagatttccagcgagtctgagacagaaagtcct
gcagtgcccaagaagaggcagtccaatgaggagcatgtgtatgaggaaactccacaggag
aagaagcttagattagctaagctttaccttgaacagctcaaggatgaagaggaaaagaga
gcagaggaagattcctttgagacagacctgatcgcaggaagacttcaagaagaagtgctt
gaacagaaaggaaagctgcagcgacttattgccaaagatctcataccaccggatgcttca
gagatccgggtgttaagaggacacaaacttccaattacatgtctggtcattgcaccagat
gacaagtgcatcttctccgctgccaaagactgctccatcattaagtgggatgttgagagt
ggtaagaaactgcatacaatacccggtggaaggaaaggtacagaggaccgccatgtagga
catacagcacacatcctgtgtatggccatatcatcagatggaaaatacttggccaccgga
gacatgaacaaactgatcatgatttgggaggcagccacgtgtaaacatctgtataaattc
acaggacacaaaggccctgtgtcgggcctttcattcaggaagggaactcatgatctgtac
agtgcctcacatgaccgctcggtcaaagtgtggaatgtggatgagaatgcatatgtggaa
actctctttggccatcaggatgctatcacaggactggacagcctgagccgtgagcgctgt
gtgactgcagggggacgagatcgcactgtgagagtgtggaagatcgcagaggaatctcag
ctggtgtttcacggccacgagggttcgatcgactgcatccagctcataaacgaggagcac
atgataacaggagccgatgatggctccgtgtctctttggagtgtcaacaagaagaagcct
ctcagcacagtaaagctggctcacggttgccatggtgacgccgggctggagcagcctcat
tgggtcgcttcagtggcggcgcttcagaactcagatactgttgcctcaggtgcctctggc
tgttcccacaactctcaggtgaacgtgtggaagtgtggccagaattatcgtgggttggag
cctctgttcagtgtcccagtgtccggttttgtcaacagtctgaagttttcaagctccggt
cagttcttggtggcaggagttggacaggagcacaggttgggtcggtggtggagactaaaa
gaagccaagaacgggatctatgttattcctcttaaaaggaaaccttctaatccagaggaa
gccaaagtgacagaatag

DBGET integrated database retrieval system