Amphiprion ocellaris (clown anemonefish): 111574994
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Entry
111574994 CDS
T06018
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C
KO
K05450
platelet derived growth factor C/D
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04010
MAPK signaling pathway
aoce04020
Calcium signaling pathway
aoce04510
Focal adhesion
aoce04540
Gap junction
aoce04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111574994 (pdgfc)
04020 Calcium signaling pathway
111574994 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111574994 (pdgfc)
04540 Gap junction
111574994 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
111574994 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
aoce04052
]
111574994 (pdgfc)
Cytokines and neuropeptides [BR:
aoce04052
]
Cytokines
Growth factors (RTK binding)
111574994 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
111574994
NCBI-ProteinID:
XP_023135647
Ensembl:
ENSAOCG00000020806
LinkDB
All DBs
Position
13:8804674..8852870
Genome browser
AA seq
364 aa
AA seq
DB search
MCVVIQTIPSPALCDRQPPLIQMILPLLFLLASLLQQYGSEAESSHASKFHLPSVKEQNG
VQDSHQEKVISVSGEGMVHSPDFPHTYPRNTMLVWRLVATSNMRIQLTFDERFGLEDPED
GICKYDFVEIEDPTEKTLLGRWCGSQSVPASHISKGSQISIRFISDEYFPSEPGFCIRYS
LLPVTVSEPEVPAVLPPSLQGIEELSEAVAGLSTVEEVMKYLEPERWQLDMEELYKPTWH
VLGKSFIHNKKAKGGTDLNLLREEVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRC
GGNCACCSHRCYDCQCVPARVTKKYHEVLLLKHRSGGRGLQKSMTDVALEHHEECACVCK
DDWD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtggtgatccaaaccatcccgtctccagcgctttgtgatcgccaaccaccactc
atccaaatgatccttccattattattccttcttgcatcgcttctccaacagtatggctcg
gaagctgaatcaagtcatgccagcaaatttcaccttccaagtgtaaaggagcaaaacgga
gtgcaagattcccatcaggagaaagtcatatcagtgtctggagaaggaatggtccacagt
ccagacttcccacacacctatcccaggaataccatgttagtgtggagactagtggcaacc
agcaacatgaggatccagctcaccttcgatgagagatttggtctggaggacccagaagat
ggaatatgcaagtacgactttgtggaaatagaggatccaactgagaagactctcctgggt
cgctggtgtgggtcacagtcggtaccagccagccacatttccaaaggcagccagatcagt
atccgcttcatctcggatgagtattttccctctgagccaggattctgcatccgctactcc
ctcctgcctgtgactgtgtcggagcctgaagtccctgcagtcctgcctccatccctgcag
ggtattgaggagctgtcagaggctgtggcagggctgagcactgtggaggaggtcatgaag
tacctggagccagagcgatggcagctggacatggaggagttgtacaagcccacatggcac
gtgttggggaaatccttcatccacaataagaaggccaaaggaggaactgatctcaatctg
ctgagggaagaggttcgactgtacagctgcactccccgcaacttctctgtatccttgcgt
gaggagctgaaaaggacagatgccattttctggcccagttgcctcctggtgaagcgctgt
ggtggaaactgtgcctgctgctctcaccgctgctacgactgccagtgcgttcctgcccgg
gtcacaaagaaataccatgaggttctcctgctgaaacatcgaagcggtggaagaggcctg
cagaagtccatgactgacgtggccttggagcaccacgaagagtgtgcctgtgtatgtaaa
gatgactgggactga
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