Amphiprion ocellaris (clown anemonefish): 111575035
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Entry
111575035 CDS
T06018
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
111575035 (trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoce04121
]
111575035 (trim25)
Enzymes [BR:
aoce01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111575035 (trim25)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111575035 (trim25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
ANCHR-like_BBOX
U-box
Motif
Other DBs
NCBI-GeneID:
111575035
NCBI-ProteinID:
XP_023135704
Ensembl:
ENSAOCG00000031721
LinkDB
All DBs
Position
4:34107137..34120468
Genome browser
AA seq
671 aa
AA seq
DB search
MMAAVEDPPFSLLSLEDELTCSICLSPFDCPVTIPCGHNFCQDCLLATWKNSYSCPQCRT
LFATRPELKKNTVLSTVVETFRSRAGGPKEESSGAEEEKKKEEVKVRCDACMEAEAAQTC
LTCMASFCEEHLRPHRENPIFRVHQLSEPVGDLSERICPDHHKLMELFCSQHGRPICSLC
LQQVHRGCAFRSPEEQRSLLESDLRSKLSLLDGKITKNETVITQMTDTQSKLKDSAVKRK
QSVAAEYQQIRDMLARDERDALNAVDREVESGQTKLRGLMKKFTENVYNMNKAKDDIHGL
LSQSRSLAFLQASFNLPEAVKFEPYSPRINLDSKKVLASQVFAAALKDHLTEILKQPVEN
RLPLPKPEIITDTCAPGERPVFPLGFKPPSPGMYQTYEPQWHLEPNRPPPRSHSPGPQSK
TGQKKKPQKTKKPQSNDDKTGNKIQARSMENLLNIDEKDTSRGRNPAADAKENPETVDIP
PDVSAAMKRNDLLKHGTVLTLDPRTAHKRIALSDGFTKAAVSDNHTNYPDCPERFTVCSQ
VLASKGFSRGRHYWEVRLSSNNFIGIGLAYGTIDRKGPTSRLGRNNQSWCVEWFNVKLSA
WHNSSETVLANPNPKRIGVLLDCENGLATFYNVADRAYPFHTFVFPFAEAVYPAFWIFSS
GSSITLCKLQG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccgtggaggatcctccgttctctctgctcagtctggaggatgagctgacc
tgcagcatctgtctgagccccttcgactgtccggtcaccatcccctgcggacacaacttc
tgccaggactgtctgctggccacctggaagaactcctacagctgccctcagtgtcggacc
ctgttcgccaccagaccggagctgaagaagaacacggtcctcagcaccgtggtggagacg
ttcaggagccgagccggaggtccgaaggaagagtcgagcggagccgaggaggagaagaag
aaggaggaggtgaaggtccgctgcgacgcgtgtatggaggcggaggcggcgcagacctgc
ctcacctgcatggcctctttctgcgaggagcacctgcggcctcaccgggagaatcccatc
ttccgggtccaccagctgagcgagcctgtcggcgacctgtcggagcgcatctgccccgat
caccacaagctgatggagctgttctgcagccagcacggccgtccgatctgcagcctctgt
ctgcagcaagtccacagaggatgtgccttcaggagcccggaggagcagcggagcctcctg
gagtccgacctccgaagcaagttgagtttactggatgggaagatcacgaagaacgagact
gtaataactcaaatgaccgacacgcagagcaagctgaaggactcggcggtcaagaggaag
cagtctgtggcggccgagtaccagcagatccgagacatgttggcccgagacgagcgtgat
gctctgaacgctgtggaccgagaggtggagagcggtcaaaccaaactcaggggtctcatg
aagaagttcaccgagaatgtctacaacatgaacaaggctaaagacgacatccacggtctg
ctgagtcagtccagaagcctggccttcctgcaggcttcatttaaccttcccgaagcggtg
aagttcgaaccttacagccctcgaatcaacctggactctaagaaggtgttagcatctcag
gttttcgctgctgccctgaaggaccatctgacggagatcctcaaacagcctgtcgaaaac
agactaccgctacctaaaccagaaattatcacagatacatgtgcacctggtgaaagacca
gtttttcccttaggattcaaacctccaagccctggaatgtaccagacatatgagcctcag
tggcatctggaacctaacagaccacccccaaggtcccacagtccaggtcctcaatccaaa
acaggccagaagaagaaaccacaaaaaaccaaaaagccccagtccaacgacgacaagaca
ggaaataagattcaggcccgttcaatggaaaacctgttgaacattgatgagaaagataca
tccagaggccgaaatcctgcagctgacgccaaagagaacccagaaactgtggacattccc
cccgatgtaagtgctgctatgaaaagaaatgaccttctgaaacatggcacagtgctcact
ctggatccgaggacggcccataaacgcatcgcgctgagtgacggcttcactaaggccgcc
gtgtccgacaaccacacaaactaccccgactgccccgagcgcttcaccgtctgctcccag
gttctcgcctctaagggcttctctcgcggacggcactactgggaggtccgactgagcagc
aacaacttcatcggcatcggcctggcctacggcaccatcgaccgcaaaggccccaccagc
agactgggccgcaacaaccagtcctggtgcgtcgagtggttcaacgtcaagctgtcagcc
tggcacaacagcagcgagaccgtgctggccaatcccaatccgaagcgcatcggcgtgctg
ttggattgcgagaatggtttggccactttctataacgtggctgaccgggcgtatcccttc
catacctttgtgtttcccttcgctgaagctgtctatccagctttctggattttctcaagt
ggctcttccatcactttgtgcaagctgcagggatga
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