Amphiprion ocellaris (clown anemonefish): 111575156
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Entry
111575156 CDS
T06018
Symbol
slx1b
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111575156 (slx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111575156 (slx1b)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111575156 (slx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-RING-like
T5orf172
PHD_NSD
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
111575156
NCBI-ProteinID:
XP_023135872
Ensembl:
ENSAOCG00000033328
LinkDB
All DBs
Position
23:complement(19499709..19509148)
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AA seq
261 aa
AA seq
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MVVEVESFFGVYMLYCINPKFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEM
ILILHGFPSDIAALRFEWAWQHPHSSRRLSHVSRRSRKESSLQFHWRVVSNMLRVAPWSR
LPLTVRWLKQEYRMDFEPSLQPPLHIPITFGSVRAKKKLPLQSAGEEDTSRCFLCKGLVK
VSEKLSCFHPSCGMSSHLICIARCFLRSEPSHLLPVEGECPSCHRSVLWGSLIRHKHGCF
GDLEEITPSASQSHWADELQI
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggtagtagaggtagagagcttcttcggcgtgtacatgctgtactgtattaatcctaaa
ttcaaaggccgtatctacatcggcttcactgtgaacccagagcggcggatcggacaacac
aacgctggacggcacagagggggagccaaaaggaccagtggcagaggaccatgggagatg
atcctaatactacatggctttccttctgatattgctgctttgaggtttgagtgggcatgg
cagcatccccactcctccaggcggctctcccatgtttctcgtcgctccagaaaagagtca
agcttgcagttccactggcgcgttgtctccaacatgctgcgggtggcaccatggagcagg
ctgcctctgacagtccgctggctcaaacaggaatacaggatggactttgagcccagtctt
cagcctcctctgcacatccccatcacttttggcagtgtgagggccaagaagaagctaccg
ctacagtctgcaggggaagaggacacatccaggtgttttctctgcaaggggctggtcaag
gtatcagagaagctgagctgtttccacccatcctgtgggatgagcagtcatttaatctgc
attgccagatgtttcctaaggtcagagccatcccacctgctaccagtggagggagagtgt
ccatcgtgtcatcgctcagtgctgtggggtagcctcatccgtcataaacatggctgcttt
ggagacctggaggagatcacaccatctgcttcccaaagccactgggcagatgaactgcag
atatga
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integrated database retrieval system
