Amphiprion ocellaris (clown anemonefish): 111575314
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Entry
111575314 CDS
T06018
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111575314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111575314
03009 Ribosome biogenesis [BR:
aoce03009
]
111575314
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111575314
Spliceosome [BR:
aoce03041
]
Complex A
U2 snRNP components
U2 related factors
111575314
Complex B
111575314
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111575314
Ribosome biogenesis [BR:
aoce03009
]
Eukaryotic type
90S particles
Helicases
111575314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_25
SRP54
Flavi_DEAD
nSTAND3
AAA_29
AAA_7
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
111575314
NCBI-ProteinID:
XP_023136121
Ensembl:
ENSAOCG00000010168
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MSKRHRLDLGDDYSSNKKRSDGRDRDRDRDREDRSRDRDRDRDRDRDRDRDRDPKPTIAP
SNSTAATSAGLPPLKQMAVQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKESFSDIITR
HQSFVLVGETGSGKTTQIPQWCVDMVRGLPGPKRAVACTQPRRVAAMSVAQRVADEMDVM
LGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDIL
MGVLKEVVRQRPDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYL
EAAIRTVIQIHMCEEDEGDCLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTL
PPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR
VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVL
QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA
KMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYH
AFKQNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRA
LCTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTD
IKPEWLVKIAPQYYEMSNFPQCEAKRQLERIIAKLESKEYSQY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagacatcgtctggatttgggtgatgactactcctccaataagaagaggtct
gatggcagagacagggaccgtgacagagaccgtgaggaccgctccagggaccgggaccga
gacagggatcgggaccgggacagagaccgggacagagacccaaagccgaccattgcccct
tctaacagcacggcagccacctcagcagggttacctcccctcaagcagatggccgtgcaa
cagcagatcaatccgttcaccaacctgccgcacacgccacgttactacgagatcctgaag
aagaggttacagcttccagtgtgggagtacaaggaaagcttcagcgatatcatcacacgc
catcagagctttgtcctagtcggagagactggctctggaaagacgacacagatcccgcag
tggtgtgtggacatggtgagaggcttgcctggtcctaagagggcagtagcttgtactcag
cccaggagagtggcagccatgagtgtcgctcaaagggtggcagatgaaatggacgtcatg
cttggacaagaggttggctactccatccgatttgaggactgcagctctgccaagactata
ctaaagtacatgacagacggtatgttactaagagaggctatgaacgacccgctgctggag
cgatacggtgtgatcattctggacgaagcccacgagcgaactctggccacagatatcctg
atgggagttctgaaggaagtggttcgtcaaagaccagatctgaaggtgattgtcatgagt
gccacactagatgctggaaagttccaggtgtacttcgacagctgtcctctgctgactatc
cctgggcgcacacatcctgtagagatcttttacacccccgagccagagcgggactacctt
gaggcagcgatccgcaccgtcattcagattcatatgtgtgaggaagacgaaggtgactgc
cttctcttcctcactggtcaagaggaaattgatgaggcctgcaagaggatcaagcgtgag
gtagatgacctcggacctgaagtcggagacatcaaaatcattccactttattccacattg
cccccacagcagcagcaaaggatctttgagccacctcctccaaggaagcccaatggtgca
ataggaagaaaggttgtggtgtcgacaaatattgctgagacctctctaacaatcgatggt
gtggtgtttgtcattgatcctggatttgccaaacaaaaggtgtacaatcctcgcatcaga
gtcgagtctttgctcgtcacagccatcagtaaagcttctgcccagcagagggcaggacga
gctggcagaactcgtccagggaaatgtttccgcctctacacagagaaggcctacaaaaca
gagatgcaggacaacacgtatcctgagattcttcggtccaacttgggatctgttgtgctg
cagctgaaaaagctgggtatcgatgacctggtgcactttgacttcatggatccaccagct
cctgagacgttaatgagggccctggagctgctgaactacctggcagctctcaacgatgat
ggcgacctgacggagctgggctccatgatggcggaatttccattggacccccagctggca
aagatggtcattgcgagctgcgagtttaactgctccaacgagatcctttccattactgcc
atgttgtcagtcccacagtgttttgtccgtcccacggaggctaagaaggcagcagacgag
tccaagatgaggtttgctcacattgatggagaccacttgacgctgcttaacgtctaccac
gccttcaaacaaaaccatgaatctaaccagtggtgctacgacaactttgtcaactaccgc
tcactcatgtccgctgacaatgtgcgacaacagctgtccaggatcatggaccgcttcaac
ctgcctcgccggagcacagaattcacgagcagagattattacatcaacattcggcgagcg
ctctgcactggtttcttcatgcaggtggctcatttggagcgcacaggtcattacctcaca
gtaaaagacaaccaagtggtccagctgcacccatctacagtcctggaccacaagcccgag
tgggtgctgtacaatgaatttgtcctcaccaccaagaactacatccgcacttgcacagac
atcaagccagagtggctggtgaagatcgcaccccagtactatgaaatgagtaacttccca
caatgtgaagctaaaagacagctggagcgaattattgccaaactagagagcaaagagtat
tcccagtactga
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integrated database retrieval system
