Amphiprion ocellaris (clown anemonefish): 111575506
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Entry
111575506 CDS
T06018
Symbol
pbrm1
Name
(RefSeq) protein polybromo-1 isoform X3
KO
K11757
protein polybromo-1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111575506 (pbrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111575506 (pbrm1)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111575506 (pbrm1)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111575506 (pbrm1)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
111575506 (pbrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111575506
NCBI-ProteinID:
XP_023136455
Ensembl:
ENSAOCG00000004301
LinkDB
All DBs
Position
5:complement(27092356..27111119)
Genome browser
AA seq
1639 aa
AA seq
DB search
MALKRRRATSPSSSVSGGDFDDSQTSSLVSSIGRKRRRTSNIPTVDPIAVCHELYNTIRD
YKDDQGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVEQLTSDFQLL
FNNAKTYYKSDSPEYRAACKLWDLYLRTKNEFVQRGEYDEDDEDGYDAQDNPGGSTEDES
APTCLKEVLEQLLDAVVSYTEPTGRLVSELFQKLPSKMQYPDYYAIIKEPIDLKIIAQKI
QLGHYRGVNAMAKDIDLLVKNAKTYNEPGSQVFKDANTIKKIFAQKKSEMEHGEPIKSSI
RIRNRRSAQGDRLSAITMALQYESDEEGILSGSVHYDEGESEAESMTSNMDMSNPIFQLY
EAVRGARNSQGQLISEPFLQLPSRKDYPDYYHQISQPICLHQIKNKMKNNEYESVEHVDS
DLTLMFENAKRYNVPHSSIYKRALKLQHIQQMKRKELLQRDDDDGDSMLSSATSDTSSTK
RKSHKKNTKKNRMKALLAAVTEAREAGTGRRLCDLFMVKPSKKDYPDYYKVILEPMDLRT
IEHNIRSDKYMTEDSMVEDMKLMFRNARHYNEEGSQVYNDADILEKIMKDRRRDLGPATD
DDDMMSPKLKIRKNSITLKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFLRLPSRA
ELPDYYIAIKKPVDMEKIKSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYRDALL
LHRVLLETRRDLEGGEDAHVPDVPRLIQELIRSLFVSVLGHQDDEGRCYSDSLAEIPAVD
PANSEKPPLNFEIIRKNVDRGCYKRLDVFQDHMFEVLEKARRLNRTDSEIFEDAVELQQF
FIRIRDELCKNGEILMSPALSYTSKHLHSDVEKEKKEKLPKEFEEDKIKREEEKREAEKR
EDPVGGSWQSNLQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIIYIERLWQDDTGEK
WLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKAPVSKILGKCVVMFVKEYFKLHPEGF
RADDVYVCESRYSAKSKSFKKIKMWTMPLSSVRFVPREVPLPVVRVASMFAPKQEEKPPE
IPDDSKMTDAIIDKEREDVPMDMTNGEPGCQYYEQLCYNNLWLKVGDCVYIGSHGLVRHR
VGRIEKMWMRDGAGYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCIIGKCIV
SSFKDYLSCRPTEVPEENVLLCESRYIESEKQMKKFKGLKRFSLSGKVVEDEIYYFRKLI
VPQKEPSPLLDRKIEELEAKFADMTDEELEDLGDDDGELGDQSLPQMQSSMSSDMDIMPY
TPPQSTPKSIKGLSKKEGSKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEWR
NLESSRKAEYEERAAKVAEQQERERAQHQTSPRAGTPVGALMGVVPPPTPMGMLNPSMTP
VSEGMMGAYRPAMMPPQGHVEGMVSMTGIPPHHIGVPVFPQHLLSVMPGFPGMPYFGVNS
IGSGSGAGNVHGSQMGLMGSGQQAPPPYPGQGQVGQPALQQPSTPVFVSPPAKSQRLLHS
EAYLRYIEGLTAESSTISKWDQALSVQRQDVRLTKEQESRLPSHWLKSKGAHKTMADALW
RLRDLMLRDTLNIRQMHNM
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaaaggagaagggcgacatccccctctagcagtgtgagtggaggagatttt
gacgatagccagacttcatcgttagtgtcttcaattgggagaaagaggagaaggacctca
aacattccaactgtggatcctattgctgtatgtcatgaactgtacaacacaatcagagac
tacaaggatgaccagggcaggatgttgtgtgagctgttcatcagagctcccaaacgaagg
aatcaaccagactattaccatgtggtgtctcagccaattgacatgatgaagatccagcag
aaattaaagatggaggagtatgatgatgttgaacaactaaccagtgactttcaacttcta
ttcaacaatgcaaaaacatattataagtcagacagtcctgaatacagggcagcctgtaaa
ctgtgggacctttatctgagaaccaagaatgagtttgttcaacgaggggagtatgatgag
gatgatgaagatggatatgatgcacaagacaacccgggagggtccactgaagatgagagt
gcgcccacgtgtttgaaagaggtccttgagcagctccttgatgctgtagtgtcttacact
gagcctactggtcgcctggtcagcgagctgttccagaaacttccctccaaaatgcaatac
ccagattattatgccatcattaaggaaccaatagatctgaaaatcattgctcagaagatt
cagctgggccactacagaggtgtcaatgccatggctaaagacatagacttgctggtcaag
aatgccaaaacttataatgagccaggatcacaggtgtttaaggatgcgaacactattaag
aagatttttgcacaaaagaaatctgagatggaacatggagagccaatcaagtcgagcatt
cgtatcaggaatagaaggtctgcccagggagaccgtctctcagctatcaccatggctctt
cagtatgaaagtgatgaggaaggcatactctctggctctgtccactatgatgagggggaa
tctgaagcagaaagtatgacttccaacatggatatgagtaatcccatcttccagctatat
gaagctgttcgaggtgccaggaatagtcaaggccaactaatttctgagcctttcctgcag
ctaccctcgagaaaagactaccctgactactaccaccagatcagtcaacccatctgcctc
catcagatcaagaacaagatgaagaataatgagtatgagagcgttgagcatgttgactcg
gatctgacgttgatgtttgagaatgccaaacgttacaacgttcctcactcctccatctac
aagcgtgcgctcaaacttcagcacattcagcagatgaagagaaaggagcttttacagaga
gatgatgatgatggagacagcatgctctcctctgccacgtctgacaccagtagtacaaaa
agaaaaagtcacaagaagaatacaaagaaaaaccgaatgaaagctctcttagctgctgtg
actgaggcacgagaagctggcactggtcggcgactgtgcgacctctttatggtcaagccc
tcaaagaaggactaccccgattattacaaggtcatcctggaaccaatggacctgaggacc
attgagcacaacatccgctcagacaagtacatgacggaagattcaatggtagaagacatg
aagttgatgttccgcaatgcacgacattataatgaggaaggttcccaggtctacaatgat
gcagacattctagagaagatcatgaaagacagacgcagggatcttgggccggcaactgat
gatgatgacatgatgtccccaaagttgaaaatacgaaagaacagcattactctaaagaag
tctaagtacttgacaccattacaacagaagctgaatgagctgtatgaagctgtgaagaac
tacactgataagcgaggccggcgcctcagtacaatcttcttgcggctgccgtctcgtgcc
gagctgcctgattactacattgccatcaagaaacctgtggacatggagaagatcaagagc
cacatgttggctaataagtaccaggatgtggatgcactggtggaagacttggtgctcatg
ttcaacaatgcctgcacttacaatgaacctgagtctctgatttaccgcgatgctctgctg
ctgcacagggtgctgttagagacgagacgtgacctggagggaggagaggatgcacatgtg
cccgacgtgccccgcctcatccaggaacttatccgaagcctctttgtttctgtgcttggt
caccaagacgacgaggggcgttgctacagtgattcactcgctgagatccctgctgttgat
cccgcaaattccgagaagccaccgctcaattttgagattatcagaaaaaatgttgatcga
ggatgttataaaaggttggatgtatttcaggaccatatgtttgaagtgctggaaaaggcc
agacggttgaataggacagactccgagatctttgaagatgctgtggagctgcagcagttc
ttcatccggatcagagatgagctgtgtaagaatggagagatcttgatgtcacctgcactc
agctatacctctaaacatctccatagtgatgtggaaaaagagaagaaagagaagcttccc
aaggagtttgaggaggacaaaattaagagagaagaggagaaaagggaagctgagaagagg
gaggatcctgttggaggatcatggcagtcaaatcttcagcgcacatacagtcaagactgc
agcttcaaggacagtatgtaccatgtaggagactatgtatatgtggagcctgcagagccg
aacctccagccccatataatctacattgaacgcctttggcaagatgacaccggggagaaa
tggctttacggttgctggttctacaggccaaatgaaacatttcatctggccacaaggaaa
ttcttggagaaggaagtttttaaaagtgactattacaacaaagctcctgtcagcaagatt
cttggcaaatgtgtggttatgtttgtgaaggagtacttcaagcttcatccagaaggattc
agagcagacgatgtctatgtctgtgagtcacgctactctgcaaagtccaagtcctttaag
aagatcaagatgtggaccatgcccctgagctctgttcggtttgttccccgagaagtaccc
ctacctgtagtccgagtggcatccatgtttgcacccaaacaagaggagaagccaccagag
attccagatgatagcaaaatgacagatgctattatagacaaggagagagaagatgtccct
atggatatgaccaacggagaaccagggtgtcagtactatgagcagctctgctacaacaac
ttgtggctgaaagtgggagattgtgtctacatcggttctcatggactcgtgcgccaccga
gtgggcaggattgagaaaatgtggatgagggacggagcaggctacttcttcggccccatc
tttatccatcctgaagagacagaacatgaacccacaaagatgttctacaagaaggaagtg
ttccttagcaacctggaggagacgtgtcccatgacctgcatcataggaaaatgtattgtg
tcgtccttcaaagactacttgtcatgtcggcccactgaagtgcctgaagagaatgttcta
ctctgtgagagtcgctacattgagagtgaaaagcagatgaagaagttcaagggtcttaag
cgtttttcactctctgggaaggtggtggaagatgaaatctactattttaggaagctcata
gtgccccagaaggagccatcacccctacttgacaggaaaattgaggaactggaggccaag
tttgctgacatgacagatgaagagcttgaggaccttggggatgatgatggcgagcttggg
gaccagtctcttcctcagatgcagtcttccatgtctagtgacatggatatcatgccttac
actcctccacagtccaccccaaaatccataaagggcctttcaaagaaggaaggttcaaag
cggaagatcaacatgagtgggtacatcttgttcagcagtgagatgcgagctgtcatcaaa
gcccagcacccagacttttcttttggggagttgagccgtctcgttggcacagagtggagg
aacctggagagttccaggaaggcagagtatgaagagcgagcagctaaagtggctgagcag
caagagcgtgagagggcccagcatcagacgtcccctagagcaggtaccccagtaggggca
ctgatgggggtggtgcctcccccaacccccatggggatgctaaatcccagcatgacgcct
gtgtcagaaggtatgatgggtgcatataggccagctatgatgcccccgcagggccatgtt
gaaggcatggttagtatgactggcataccaccacatcacataggggtgcctgtttttccc
caacatctcctgtccgttatgcctgggttccctggaatgccatactttggtgtcaatagc
attggaagtggatctggagcaggaaatgttcatggatctcagatgggtttgatgggctca
ggccagcaggctccgcccccttacccaggacaaggccaggtgggacaacctgccctccaa
cagccatccaccccagtgtttgtttcaccacccgccaagtctcagcggctgctccactcc
gaggcctacctcagatacattgagggccttactgcagaatcctctaccattagcaagtgg
gaccaagctctgtcagttcaaagacaagatgtgcgcctaacaaaagagcaagagagtaga
ctgccgtctcactggctgaagagtaagggggcccacaagacaatggcagacgcactttgg
cgactccgtgacctgatgctgcgagacaccctaaacatccgtcagatgcacaacatgtag
DBGET
integrated database retrieval system
