Amphiprion ocellaris (clown anemonefish): 111575510
Help
Entry
111575510 CDS
T06018
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111575510 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aoce04147
]
111575510 (irf6)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
111575510 (irf6)
Exosome [BR:
aoce04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111575510 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
111575510
NCBI-ProteinID:
XP_023136466
Ensembl:
ENSAOCG00000004183
LinkDB
All DBs
Position
5:27134805..27140802
Genome browser
AA seq
488 aa
AA seq
DB search
MSVTPRRVRLKPWLVAQVDSGRYPGLVWIDRDAMRFRIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDVCDIPQPL
SNQGSSDAGSWTPGDDDGGEEDLPDTPGSPPPYPSNGASPSPLIMWSPDSSMQPLSCPPS
NEVWPKEEPVKIWPKEEPVDVEMHPTPLVDLPPAPLPDPSMQPTLLTDALFASPEMWISS
LPMTDLEVQFLYRGREMCPTVTVSNPQGCRLFYGDLGPMVNQEELFGPINLEQLRFPSTE
HITNDKQKIFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCANPGAPNLIERQR
KVKLFCLESFLSGVIAHQRGQTPNPPEFEISLCFGEEWPDGKPRERKLIMVQVIPVVARM
ISEMFSGDNTRSFDSSSVRLQISIPDIKDNIVTHLKQLYCLLQGHQGQDGWALPPGSGLN
IAQALQNQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcacacctcgacgcgtccgcctcaagccctggctggtcgcgcaggtggacagc
ggacgatacccgggtctggtgtggattgaccgtgacgccatgcgcttcaggatcccatgg
aaacacgccacaagacacacaccgcagcacgaggacgaagacaccatatttaaggcatgg
gctgtggagaccgggaagttccaggagggagttgatgaacctgatcctgccaaatggaaa
gctcagcttcgatgcgccctgaacaaaagccgagaattcaacctcgtgtacgacggcacc
aaagaggtccccatgaaccctttgaagatttatgatgtctgcgacatcccacagcccctc
agtaaccaaggctcttcagacgctggttcttggactccgggtgatgacgacggtggtgaa
gaagatcttccagatacaccagggtctccccctccatacccatccaatggcgccagtcca
tctcctctgattatgtggtctccggattcatccatgcagcctcttagttgccctccgtcc
aatgaggtctggcccaaagaggaacctgttaaaatatggcctaaagaggagcctgtggat
gtggagatgcacccgacgcctctggttgacctgcctcctgctcctctgcctgatccctcc
atgcagcccactctgctgactgacgccttattcgcgtctccagaaatgtggatcagttcc
ctcccaatgacagacctggaggtgcagttcctctacagagggagggaaatgtgtcccaca
gtgaccgtcagcaacccgcagggctgcaggttgttttatggagacctagggccgatggtc
aaccaggaggagctgtttgggccgatcaacctggagcagttacgctttcccagcacagag
catattaccaacgacaagcagaagatcttcaccaaccgcctgctggatgtgatggacaga
ggcctgatcctggaggtcagcggccatgacatctacgcagtccgcctctgccagtgtaaa
gtgtactggtccggcccctgtgcgaacccaggcgcaccaaatctgatagagcggcaaagg
aaggtcaaactcttctgtctggagtcttttctcagtggtgtgatcgcccaccagcgcggc
cagacaccaaaccctcctgagtttgaaatcagcctgtgttttggagaggagtggcctgat
ggtaaaccgagggagaggaaactgatcatggtccaggtgattccagtggtggcccgaatg
ataagcgagatgttctctggagacaacacacgatcgttcgacagcagcagcgttcggctg
cagatttcaatcccagatatcaaagacaacatagtgacccacctaaagcagctgtactgc
ctgctgcagggccaccagggccaggacggctgggcgctgcctcccggctcgggcctcaac
atcgcccaggctctgcaaaatcagtga
DBGET
integrated database retrieval system
