Amphiprion ocellaris (clown anemonefish): 111575566
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Entry
111575566 CDS
T06018
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111575566 (vps13a)
Membrane trafficking [BR:
aoce04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111575566 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
111575566
NCBI-ProteinID:
XP_023136544
Ensembl:
ENSAOCG00000023130
LinkDB
All DBs
Position
6:26231105..26271155
Genome browser
AA seq
3280 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGDAVLTNLEIKENALSQLDIPFKVKAG
HIGRLELKIPWKNLYTQSVEATLDGVYLLIVPTASIKYDAEKEEKQLQEARQRELQRIEE
TKLKAAEQENPKLEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDVTNPNCPLSFGVSLK
NLSLQTSDENWNPSLLDENSRLFFKLVQLDNLFAYWNVNSVLFSNHSADEALQCLKSSME
ISHSFSVSHDFIFRPISADAKLRMNPRSDVDFSSPKVDLMVNLSEVAIELNRPQYISILE
LLGSVDMMSRNLPYRKYRPMVQVHKNTHIWWKYVITGILEVDVKPRLHMWSWQHIRRHRR
MVKCYRELYKTKITSKKPSEELLKQLEEPEKSLDIFNITLARQQAEVEASKAGLRIYRPG
MKMEEEESQGWLSWMWNWGGEAETETKEAKTGGFDELLTPAEKSRLYMAIGYSETAANPN
LPKDFEDMKINFHMERLSVSFKDNKDKNEIIRLTVGELQSTLTQRPGAQAIKITAQLSLF
EVTGLASDRPAPTLLSSRKAATGAGTPLLCILFETNPLDESANQRLHVESQPLEIIYDAI
TVNSMSAFFMPPDDLQLDELTNATLMKLEQFRDRTATGLMYVIETQKVLDLKVNLMASYV
IIPQTGFYNGTQNIVLLDLGHFQMSSQSKKHLPQLSVGSSNIEDIISRAYDSFDIQLSSL
QFLYSKPDGDWKKARKQKQSPLHILEPVDLKVVFSRAMVVKDSRMAKYKMSGELPLLSLR
ISDKKLRRVLELVESIPLPESRPPARNTATSSSSKSKQSYTPQLTPRRPLNLADQRSSLI
FESCETISITSLGSEEDLFFDAPSSPIGDKPFFPDNPMPLRYADLSKRRSLLKEDTQKNM
TDLILTFEISEFSIQLCRLSGAQEVTVLHLDIEGLGTELKLRTFDMTSNTYLREICLKCP
EYMDSEDKQVQLITTLDNTEVDLLTLEYIKADKNGPEFKTQHNNTEQLIKVTFSSLDVHL
HTEALLNAMNFLNNLLPPSTKKEGGQEELPTIPEEDEGEGEKEGEKKEETTVTRKKSSKS
SKFADVVNLHIRADLHCLKVFIRGEKARISEIGIEGLVSEVLMRKKEMEVLANLKNIVIL
DCNKDAFYKKAVSIADKEVFAFRMINYTDATEGDAYLDMSKVDTSVSLTVGCIQVIYLNK
FVSSILAFINNFQEAKEALAEVTVQAAEKAASGVKELAERSTRIALNVHFNAPIIFLPQS
SSSSNVIVADLGLLSVKNYFAKQPFKSDAKIPPVVDIMTVRLTDLKMYRTTYINEGFQGE
TQLLKPVSLDLEIQRNLSSNWYHSIPDIGITAHLKPMSLILCQDDMIVVLRTLSENLSEK
SDAVPPPAALPPTDRSSDSVSNKESQDSGTNGPTNSNTVVTAAVVETQKNSKLKSTLKVD
FKFDSMTVVVYSPNENEILPLDSHDEQLKLAEFTLGTISTSVHMFSDSSMKASVRLSTCL
LDDKRPKIKMVTPRMMALRPGAEQNMMVEVNYRQGRDGTTLDTVVQDVYLCASMEFLLTV
ADIFLKATQQGFAQVPQPKNSSGAGEKKNINSSVTSKESTTTPAVVSKTEMNVVVRNPEI
VFVADLTRADAPALVMTTQCELLMKSGTAGSQTTAVIKDLKVVACPFLREKRRHNVTTVL
QPCQVFFESTQSSTSPQAMEVSINALSLKVSPIIINTVITIQSALTPTAETPEELDSPVP
VDLWEKRSWKELKLWFLDEEGDEDTQSLVPLIPQGESLQVTIRSICLTLEAGVGHRTIPM
LLAKSSFHGDVKNWSTLIDLHSGLNLEVHYYNEVMGVWEPLLEPLEDETRDGFRPWRLEL
KMKKKPVKYTGVSDEVDFMVPDYKTVIVISSTDQLNITLSKCGLAMLSNLGTAFAEAAKQ
TAECFQKDEAPFVVKNRLGLPVSVRHSEMFCPIGQQSTNNTVKLQDGETLGMDYSTTTES
DQFSAMISLSGKDYYIQPTPVGHTSASVIPLIKVGRGLYSVMHKESGVTRFLVCQIYSVE
GSKYIKIRSPFQIINHFSIPFKVFEGPTCLGTALPTEEFCVPLDSYRSELSLQPITDDQA
DGEEEQFECSEGFSYEDVSNQQPETHLQQTCRRRGDQGGVMTVNIVPVKDAVTIKDTGGA
GENFDVPFVLHLWPSILLRNLLPHPIAYKLKQDSGVSLPEATLDPGHSAQLPTAVINQSS
LDLRLLNYLAQDWSAEYSLQSDQEEITFIVFQSLRENDEDDGEGTERKRAELDIAVHVKC
DPGQMVVAIHSPYWMVNKTGRLLQYKADDIHRKHPLDYDMPLLFSFKPRYFLRNNKVRLM
ISDSDLSDEFSLDTVGSHGDVKCKGRYKDYLVGVKIDASSFSLTRIVTFVPFYMLVNRTK
HSVFICEEGQETWTEAEPEQSAIPFWPENDTKRLKIKVGGCLLPPQTIDFTRPENCLLLH
LDNSVGGIVVDVNLSEHSATIRFSEYHDGAAPFLIINHTKDQTLQFHQSARTESTWVPDE
LLDLSFSEEEDSSQKETEQEELEAGKAVHYTWNQPTGSRELCWTCGTYGGKLRSEEDLLM
DMNNEGKLFVISFYEGLQRVVLFTEDQRIYKVLCESERAQLAEQEIILSLQNMGVSLVNN
SSSQEVSFIGITSSDVVWESKPKKKNRWKTMSTKEAEILENSFKDYMESGPVDNAIRDLE
NNFQVSFTPNGMDMQMLQPVEAPLRRHFLPGVKVEYSISPRQRAYRVKIHRIQIQNQLPG
AIFPYVFYPVKLPKSIAMDSEPKPLTDISIVTRAAGHSDISRIKYFKVLIQEMDLKLDLG
FLYAILDLFTPENASIMSSEQEVELFEKDIEYIKTELNHASAADTSPISLYEYFHISPIK
LHLSFSLSTGGEDGLKEKRDTELIPVQSLNLLLKSIGATLTDVQDVVFKLAFFELKFQFC
TTQQLQWEVIRHYSKQAIKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPYQGAIQGP
EEFIEGMALGMKALVGGAVGGIAGAASRITGAMAKGVAAITMDEEFQQKRREAMNKQPSG
LREGLTRGGKGLVSGFVSGITGIVTKPIKGAQKEGASGFFKGVGKGLVGAVARPTGGIID
MASSTFQGIKRAAETSQDVESLRPPRFIHEDGVIRPYKEKEGIGSQMLQKIENGRFAKYR
YFAHAKVNDSDFLMITKRGIFFVTKGTFGQLTCEWQYLFEEFTKDPMIVEERRLRIEAKE
RVKSVFHAKEFGKIINFRTPDIAKWVLAKLEDARESLPKY
NT seq
9843 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgaaagcttggtggtagatgtcctcaaccgatttttaggggactacgttgtc
aacctagacagctcgcagctgaagctcggcatatggggaggtgatgctgtactcacaaat
cttgaaataaaggaaaatgccttgagtcaacttgacattccttttaaagtgaaagccggt
catataggacgactggagctaaagattccatggaagaacctctacactcagtcagtcgag
gccacactggatggtgtctatctactgatagtccccacagcaagtataaagtatgatgcc
gaaaaggaggagaaacagctacaggaggctcgtcagagggagctacagcggatagaggag
acaaagctaaaggctgctgagcaagagaaccccaagctagagaagcaagacacctttgtg
gaaaaacttgtcactcaggtcataaaaaacctgcaagtcaagatctctaacatccacgtg
cgctatgaagatgatgtcactaatccaaactgtcctttgtcatttggagtatcactcaaa
aacctcagccttcagacatctgatgagaattggaatccaagtcttttggatgagaattcc
aggctttttttcaagttggttcaactagacaacttgtttgcctactggaatgtcaactca
gtactcttctccaatcacagtgcagatgaagccttgcaatgtctcaagagcagcatggaa
atcagccactctttttctgtcagccacgacttcatttttcgtcccatctcagcggatgct
aaactgcggatgaatcccaggtcagatgtggatttctcttctcctaaagtggacctaatg
gtcaatctcagtgaggtggccattgaactcaacagaccccagtacattagcatcttggag
ctgctgggctctgtggatatgatgtcacgaaacctgccatacaggaagtacagacccatg
gttcaagttcacaagaatacccacatatggtggaagtatgtgatcacaggcatcctggag
gtagatgtaaagccacgtctccacatgtggtcatggcagcacattcgccggcaccggcgg
atggtgaaatgctacagagagctctacaagacaaagattaccagcaagaaacccagtgag
gagctcctcaagcaactagaggagccagagaaatccttggatatttttaacatcacactg
gccagacagcaggctgaagtggaagcaagcaaggcaggtctgcgtatttaccgtccaggg
atgaagatggaggaagaggagtctcagggttggttgagctggatgtggaactggggagga
gaggctgaaacagaaacaaaagaggccaagactggaggttttgacgagttgttaacccct
gcagagaaatccagactctacatggccatcggatacagtgagactgctgccaatcccaac
ctgccaaaagattttgaggacatgaaaatcaatttccacatggagaggctgtctgtgtcc
ttcaaagacaacaaggacaaaaatgagattatcagactgactgtgggagagctccagtct
acactcacacagagacctggagcacaagcaataaaaatcacagcacaacttagtctgttt
gaggtcactggcctggccagtgatcgacctgcaccaaccctcctttcgtcaaggaaggca
gctacaggtgcagggaccccgctgctttgcatcctgtttgagaccaatccactggatgag
agtgcaaaccagcggcttcatgtcgaatcacaacccttggaaatcatatatgatgcgata
acagtgaacagcatgtcagcattcttcatgcctccagatgacctgcagctggatgaactc
accaatgcaaccctgatgaaactggagcagttcagagaccgaacagccaccggtttaatg
tacgtgatcgaaacacagaaagttctcgacctgaaggtgaacttgatggcctcctacgtc
atcattccacagactggcttttacaatggcacccagaacattgtgcttttggatcttgga
cacttccagatgtccagtcaaagcaagaagcatctgcctcagctgtcagtgggctccagt
aatattgaagacatcatctccagagcatatgatagctttgacatacagctgagcagcctg
cagttcctatatagcaaaccagatggcgactggaaaaaggctcgtaaacagaaacagtca
ccactccacatcctggagccagtggatctcaaagtggttttcagcagggcgatggtcgtc
aaagactcccgcatggcaaagtacaagatgtctggagagcttcctctgttgtctcttcgc
atttctgataaaaaacttcgaagagttctggagctggtagaaagtatcccactgcctgag
agcagacctcctgcacgaaacactgctacatcctcatcttcaaagtcaaaacagtcgtac
acccctcagctcactcctagaagacctttgaacttagctgaccaacgctcctctctcatt
ttcgagtcatgtgagaccatcagcatcacctcactaggatcagaggaagatttgttcttt
gatgcacccagctctcccatcggagataaaccattcttcccagacaatcccatgccgctg
cgctacgcagatttaagcaaaagaagaagtctcctcaaggaagacactcagaagaacatg
actgatttaatcttgacatttgagatcagcgagttttccattcagctctgtcgtctctct
ggtgctcaggaggtcacagtgcttcacttggacatagagggtttgggcactgagctgaaa
ctgcgcacttttgacatgacatctaacacctacttgcgagagatctgcctcaagtgtcct
gaatacatggattctgaagacaagcaagttcagctcatcaccactttagacaacactgaa
gttgacctactcaccctggagtacatcaaagctgataagaatggtcctgagttcaagacc
caacacaacaatacagagcagctcatcaaggtgactttctcatccctggatgttcatctc
catacggaggctctcctcaatgccatgaacttcctcaacaatctccttcctccttccact
aagaaagaaggagggcaggaggagctccccaccatccctgaggaggatgagggagaggga
gaaaaggagggagagaagaaggaggaaaccactgtaaccaggaaaaaatcttcaaagagt
tcaaaatttgcagatgtggttaatttgcatatcagggctgatctccactgcctaaaagtt
ttcattcgaggagaaaaagccaggatctctgagatcggtattgaaggtctggtttctgag
gtcctgatgagaaagaaggagatggaggttctggccaacctgaagaacattgtgatccta
gactgcaataaagatgccttttacaagaaggctgtgtctatagcagataaggaagtgttt
gccttccgaatgataaactatacagatgcaacagaaggagacgcctatctggacatgtct
aaagttgatacctctgtctctctgacagtgggctgcattcaggtcatctacctcaacaag
tttgtctcttccattctggcattcatcaacaacttccaggaggctaaagaggcactggct
gaggtgacagtccaggctgctgaaaaggcagcatcaggagtgaaggaactggcagagcgg
agcactcggatcgcccttaacgtccactttaatgcacccatcatcttcctcccccagtca
tcctcttcctcaaatgtcattgttgctgaccttggtctcctgtccgtcaagaactatttt
gctaagcagccctttaaaagtgacgcaaagatcccgcctgttgtcgatataatgacagtg
agactgactgacctcaagatgtacagaacaacgtacataaatgaaggttttcagggagag
acccagctgctgaagcccgtcagcctggacttagaaattcagagaaatctgtcatccaac
tggtaccacagcatacctgacatagggatcactgctcatctaaagcccatgagtctgatc
ctctgtcaggacgacatgattgtggttctgaggactctgagtgagaacctgtcagaaaag
tctgatgctgttccacctccagctgctctgccccccaccgaccgctcctctgactctgta
tccaacaaagaatcccaggactctggaaccaatggaccaacaaacagtaacacagtggtg
acagctgctgttgtggagacacagaaaaacagcaaactgaagagcacgctcaaagtagac
ttcaagtttgactccatgacggtggtagtgtacagccccaatgaaaacgagatactgccg
ttagactcacatgatgagcagctgaaacttgctgagtttacgctgggcaccatctccacc
tccgtccacatgttctctgacagttcaatgaaggcctcagttcgactctccacatgcctt
ctagatgacaagaggccaaaaatcaagatggtcactccaaggatgatggcactgcgtcct
ggtgcagaacagaacatgatggttgaggtgaactatcgtcagggccgtgatggcaccact
ttagacacagtggtgcaggatgtgtacctgtgtgccagcatggagttcctgctcacagta
gcagacatctttcttaaggccacccagcagggctttgctcaagtgccacagcctaagaac
agttctggtgctggagagaaaaagaacattaactcctctgtcacatctaaagagtccact
acaactccagctgtggtgtcaaagacagagatgaatgttgtggtgcgtaacccagagatt
gtgtttgtggctgacctgacgcgtgctgacgccccggccctggtgatgaccacacagtgt
gagctactgatgaaaagtggcacagctggatcacagacgactgctgttatcaaggacctc
aaggtggtggcgtgtcccttcttaagagagaaaaggagacacaatgtgaccacagtactg
cagccgtgtcaggtgttctttgagagtactcagtcttcaacctcccctcaggctatggag
gtctccatcaacgcactgtcactgaaggtatctccaatcatcatcaatacagtaattacc
atccagtcagcactgactcccacagcagagacacctgaggagctggacagccctgttcct
gtggacctgtgggagaaacgaagctggaaggagctcaagctctggttcctagatgaggag
ggggatgaagacacgcagtcactggtcccattgattccacagggagagtcgctacaggtg
accatcagatcaatctgtctgactctggaggctggtgtcggacaccgcactatccccatg
cttctggccaagtcctccttccacggtgacgtgaaaaactggtccacgctcattgactta
cacagcgggctcaacctggaggttcactattacaatgaggtgatgggagtgtgggagccg
ctgctggaaccgttagaagatgagactagagatggattcagaccatggaggctggaactg
aagatgaagaagaaaccagtaaagtacacaggcgtttcagatgaagtggatttcatggtc
ccagactataagacagttattgtcatcagcagtacagaccagctcaacatcacactctcc
aaatgtggactggccatgctgagtaacctgggcacggcattcgcggaggctgccaaacag
acagcagagtgttttcaaaaggatgaagctccatttgtagtgaaaaaccgtctgggcctg
ccagtatcagttcgccacagtgagatgttttgtcctatcggccagcagagcaccaacaac
actgtgaagctgcaggatggtgaaacacttgggatggactattcaaccacaacagagtct
gatcagttctcagctatgatctctctgagtggaaaggactactacatacagcctactccg
gtgggccacacctcagccagtgtgatccctctgatcaaagtgggcaggggattgtacagt
gtaatgcacaaagagtccggagtcactcgtttcctggtctgtcagatttactctgtagaa
ggcagcaagtacatcaagatccgctctcctttccagatcatcaatcatttctcaataccg
ttcaaagtttttgaaggaccaacatgtctgggtacagctcttcctactgaggagttctgt
gtgcctctggactcttatcggtctgaactcagccttcagccgataacggatgatcaagct
gacggtgaagaagagcagtttgagtgctcagagggcttcagttacgaggatgtcagcaac
cagcagcctgagacgcacctgcagcagacctgtcgtcgccgtggagatcagggtggtgtg
atgacggtcaacattgtgccagtaaaggatgcagtgacaattaaagacactggaggtgct
ggggaaaactttgacgtgccctttgtgcttcacctgtggccttccatcctgctccgcaac
ctgctccctcaccccatcgcctacaaactaaagcaggacagtggagtctctctccctgaa
gccactctggaccctggccactctgcccagcttcccactgcagtcatcaatcaatccagt
ctcgacctccgcctactgaactacttggctcaagactggtctgctgaatacagcctccag
agtgatcaggaagagatcaccttcattgtgttccagtctctacgagagaatgacgaggat
gatggagaagggacagagaggaagagggctgagctggatatagcagtgcatgtcaaatgt
gatccaggacagatggtggttgccattcactcaccatactggatggtgaataagacaggc
aggttgctgcagtacaaggcggatgacatccatcgtaaacaccctctggactatgacatg
ccgttgctcttctccttcaagccacggtacttcctgcgaaacaacaaggtccgtcttatg
atctctgacagtgacctatcagatgaattctcactggacacagtcggtagccatggagat
gtgaaatgtaaaggcagatacaaagactatctggttggtgtgaagatcgacgcgagcagc
ttcagtctgactcgcattgtgacctttgtgcccttttacatgctggtcaacagaaccaag
cacagtgtcttcatatgtgaggaggggcaagaaacctggactgaggcagaaccagaacag
tcagctattcccttctggcctgagaatgacaccaagcggctgaagatcaaagtaggaggt
tgtttgttgcctcctcagactattgacttcactcgaccagaaaactgcctattgttgcat
ctggacaactctgtgggcgggatcgttgtagacgtgaatctgtctgagcactcggccaca
atccgattctctgagtaccatgacggtgcggcccccttcctcatcatcaaccataccaaa
gaccagactcttcagtttcatcagagcgcccggacagaatccacgtgggttcctgacgag
ctgctcgacctctccttctcagaggaggaggacagttctcagaaggagacggagcaggag
gagctggaggctgggaaagctgtgcactacacctggaatcagcccactgggtcccgagag
ctttgctggacctgtggcacttatggagggaagctgaggagtgaggaggacctgcttatg
gacatgaacaatgagggaaaactttttgtgatttctttttatgaaggtctccagcgtgtt
gtgcttttcactgaggatcagcggatctacaaggtgctctgtgagagtgagagggcacag
ctggcagagcaggaaatcatcctgtcactacagaacatgggcgtgtctctggtcaataac
agcagcagccaagaggtttcctttattgggatcacaagctctgatgtggtatgggaatca
aaacctaagaagaagaatcgatggaagactatgagcactaaggaagccgagatattggag
aacagcttcaaagactacatggaatctgggcccgtagacaatgccattcgtgatctggaa
aacaacttccaggtgagttttactcccaatggaatggatatgcaaatgttgcagccggtt
gaagctcctctcaggagacacttcctgcctggtgtgaaggtggagtacagcatctcacca
cgacagagagcctatcgtgtcaaaatccaccgcatacagatccagaatcagctgccaggg
gccatcttcccctatgttttttaccctgtgaaactgccaaagtctatcgctatggactca
gaacccaaacctctaactgatatcagcattgttaccagagcagcaggccactctgatatc
tctcgcatcaagtacttcaaggtgctgattcaagagatggatctgaagctcgatctgggc
ttcttgtatgccatcctggaccttttcacccctgagaacgccagcatcatgagctcagaa
caagaggtggaattgtttgagaaggacatagagtatataaagacagaactaaaccatgcc
tctgctgctgacacatctcctatcagcctctatgagtactttcacatttcccccatcaag
ctgcacctgagtttctctctgagcacgggaggagaagatggattgaaagagaagcgagat
acagaacttatccccgtccagtccctcaacctgttgctgaagagtattggagcaactctc
actgacgtgcaggatgttgtcttcaaactggccttctttgagttgaaattccagttttgt
accactcagcagctccaatgggaagtcatcagacattattctaagcaggctattaaacag
atgtatgtgctggtgttgggcctggatgtgcttggaaacccctttggactgatcagggga
ttgtcagagggggtggaggctttcttctatgagccctatcagggagccattcagggtcca
gaagagtttattgaaggaatggctcttgggatgaaagctctggttggtggagctgtaggt
ggtatagcaggtgcagcgtccaggataacaggcgccatggcgaagggtgtcgctgccata
acgatggatgaggaattccagcagaagagacgagaggctatgaacaaacaacccagtggt
ctgagagaaggactgaccaggggtggaaaaggattggtgtctggttttgtcagtgggatc
acagggattgttaccaaacctattaaaggagcccagaaggagggcgcatctggcttcttt
aaaggtgttggtaaaggtttggttggtgcagtagccagacctactggaggcattattgac
atggccagcagcaccttccaagggatcaagagggcagcagagacgtcacaagatgttgaa
tctctacgtcctcctcgcttcatacatgaggatggtgtcatacgaccgtacaaggagaag
gagggcatcgggagtcagatgctccagaaaattgagaatggacgttttgccaagtacaga
tactttgctcatgctaaggtcaatgattctgacttcctcatgatcaccaagagaggaata
ttttttgtgactaagggcacctttggccagctgacctgcgagtggcaatatctgtttgaa
gagttcaccaaggatccaatgattgtagaggaacgccgccttcgcattgaggccaaggag
agagtgaaatcggtcttccacgccaaagagtttgggaagatcataaacttcagaactccc
gacatagccaagtgggttcttgctaaactggaggatgccagggagagtttaccgaagtac
tga
DBGET
integrated database retrieval system
