Amphiprion ocellaris (clown anemonefish): 111575870
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Entry
111575870 CDS
T06018
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111575870 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111575870 (usp39)
Spliceosome [BR:
aoce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
111575870 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
111575870
NCBI-ProteinID:
XP_035809339
Ensembl:
ENSAOCG00000023553
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Position
6:complement(25560643..25567705)
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AA seq
499 aa
AA seq
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MISLKREREDGFDDDDNEDGVAAKVVRGRVVEDRRSRHCPYLDTINRSVLDFDFEKLCSI
SLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNV
PPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKPSIITKAFQGSMRIFSKKLPHPDLLP
EEKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGSTE
KEYKTYKENFLKRFQLTKLPPYLVFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEE
AQATEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLSEA
YIQIWKRQESDDTNNHTGV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatttcattgaagcgagaaagagaggatggtttcgacgatgatgacaatgaagacgga
gtggcagctaaagtagtacgaggacgtgtagtagaagaccggagaagccgtcactgccct
tatcttgacaccataaacaggagtgtgctagactttgacttcgagaagctctgctccatc
tctctctcacacatcaacgtctacgcctgccttatatgtgggaaatattttcaaggcaga
ggtctgaagtctcatgcatacactcacagtgtccagtttacccaccatgtgttcctcaat
ctgcacacactcaagttttactgtctgccagataactatgagatcatcgactcgtcacta
gaggacatcacgtatgtgttgaaaccaactttcaccaagcagcacattgcaggactggac
aagcagggtaaactgtacagagcctacgatggtacaacctacctgccaggcattgtgggg
ctcaacaacatcaaagccaatgactacgccaatgtggtcttacaggctttttccaatgta
ccgcctttgcgaaattactttctggaggaggaaaactacagaggaatccgcaggccaccg
ggagatatcatgtttctcttggtgcagaggtttggtgagctgatgcgcaaactttggaat
ccgaggaacttcaaggcccatgtgtctccccatgagatgctccaggctgtagtcctgtgc
agcaagaagaacttccaaattaccaagcaaggtgatgctgtggacttcatgacgtggttc
ctgaatgctctgcatggtgctcttggaggcacaaagaaaaagccatcaatcattacaaag
gcatttcaaggctccatgcggattttctccaagaaacttccacacccagatttactacca
gaggaaaaagaagcgctgcttgtaacggaggagtaccaggagcagatgtctgaatccacc
ttcctgtttctgaccctcgaccttccaacagctccactgtacaaagatgagaaggagcag
ctcattatcccacaggtccctctcttcaacatcctgggcaagttcaatggcagcacagag
aaggaatacaaaacctacaaagaaaatttccttaaaaggttccagttgaccaaactgcct
ccgtacctcgtcttttgcatcaaaagattcaccaagaacaacttcttcgtggaaaagaac
cccacaattgtcaacttccccatcacgaatgtagaccttcgtgagtacttgacagaagaa
gctcaagcaacagagaagaacacaacttacgaccttgttgcaaacgtagtgcatgatggg
aaacctactgagggagcttacagaatacatgttctgcatcacgggactgggaaatggtac
gagatgcaggacctgcaggtgaccgacattctcccccagatgatcacactgtcagaggct
tacattcagatctggaagagacaagagagtgatgacacaaacaaccacacgggggtgtaa
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