Amphiprion ocellaris (clown anemonefish): 111575937
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Entry
111575937 CDS
T06018
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04080
Neuroactive ligand-receptor interaction
aoce04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111575937 (gabra6b)
04082 Neuroactive ligand signaling
111575937 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111575937 (gabra6b)
Ion channels [BR:
aoce04040
]
Ligand-gated channels
GABA-A
111575937 (gabra6b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
111575937
NCBI-ProteinID:
XP_023137137
Ensembl:
ENSAOCG00000007911
UniProt:
A0A3Q1AT99
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Position
14:6425283..6456236
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AA seq
480 aa
AA seq
DB search
MLILKVDLGFLVVGCLRGMAFLLTCLFLSCYSANSVWGNQHSETSIYLDNITRILDRLLD
GYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEIL
RLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLM
NFPMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSEMLK
SNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVL
TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAA
MKAAAQEAAAAAAAAAAAPAAATGNDSEVSSVDASSVLKKRMNSAPLFDRPAKTFPNPPV
NAQAFLQQGSAVPANNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDTV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgctgattttaaaagttgacctgggatttctagttgtcggctgtttgcgaggcatggct
ttccttttaacttgcttatttctgtcttgttacagtgcgaacagtgtttgggggaatcag
cacagtgagaccagtatctatttggacaacatcacgcgtatattggatagattactggat
ggctatgacaacaggctgcgacctggatttggaggtccagttacagaggtcaaaacagac
atcttcgtcaccagctttggacctgtttcagatgtcgagatggaatacaccatggacgtg
ttctttcgtcagacatggattgacgaaaggctaaaattcgagggccccattgagatcctg
cggctcaacaacctgatggtcagcaagatctggacaccagacacctttttccggaatggc
aagaggtcgatctctcacaacatgaccacccccaacaagctgttccgcatcatgcagaac
ggaactatcctctacaccatgagattaactataaatgcagaatgccccatgcgtctgatg
aacttcccgatggacggccacgcctgcccactcaagtttgggagttatgcctaccccatc
agtgagattgtgtacacgtggaagaaaggtcctttatcttctgtggaagtgccgcaggaa
tcatccagtttgttgcagtacgacctcattggtcagacagtatcaagcgagatgcttaaa
tccaatacaggagaatacgtcatcatgaccgtccacttccacctccaaaggaaaatgggc
ttctttttaattcagacttatattccttgtattatgacggtcatcctggcccaagtctct
ttttggattaataaggaatcggttccagctcggactgtgtttggtatcactaccgtcttg
accatgacaacgctaagcatcagcgcccgccattccctccccaaagtctcctacgccaca
gccatggattggttcatcgctgtttgctttgccttcgtcttctccgccctgattgagttt
gcggctgtcaactacttctccaccctgcaggccaaccgggagcttcggaaggcggcagcc
atgaaggcggcggctcaggaggcggcggctgcagcggcagcggcagcggcagctccagct
gcagccacggggaacgactcagaggtttcctcggtggatgccagcagcgttctgaagaag
aggatgaactctgccccgctgtttgaccgccctgccaaaacatttcccaacccgcctgtc
aatgcccaagcgttcctgcagcaaggctcagccgtaccggccaacaacgttctgactggc
accagcatcatcgacaaatactcccgcatcctctttcccctttcgtttggcgccttcaac
ctggtctactggatcgtctatctcaccaaggacaccatggagatgtccagggataccgtc
taa
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