Amphiprion ocellaris (clown anemonefish): 111575955
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Entry
111575955 CDS
T06018
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111575955 (ctcf)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111575955 (ctcf)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111575955 (ctcf)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111575955 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-met
zf-C2HE
DTHCT
zf-C2H2_6
zf-C2H2_15
zf-WIZ
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
111575955
NCBI-ProteinID:
XP_023137175
Ensembl:
ENSAOCG00000006743
LinkDB
All DBs
Position
3:30337482..30355905
Genome browser
AA seq
844 aa
AA seq
DB search
MDGGPSEGVGVVDDPTKDFPSIQAVHSQDAMVADLLQQAAEAGGVVEGQGGVVLEQGHGE
GMVAAAQSQQQLMEAGVEVGVEGGAGVEMMVMDSLDPTLLQMKTEVIDAAVGGSSATVGV
VGGVAGAAHQATVTTVDQTQIITLQVVNMEEQAALGLGELQLVQVPVSATTVEALQQGTF
VDTTAMPKDGDPVICHTLPLPEGFQVVKVGANGEVETVEQEEEGVVAHPEEEEDEEVGNQ
LLEEGEDEPIQPQNDDTNWAKDPDYQPPSGIVKKTKKGKKSRLRYAEGDKDMDVSVYDFE
EEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHT
DERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEK
PFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYEC
YICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKC
RYCDAVFHERYALIQHQKSHKNEKRFKCDMCDYCCRQERHMVMHRRTHTGEKPYACSQCE
KTFRQKQLLDMHFKRYHDPNFVPTAFVCPKCSKTFTRRNTMARHAENCSGEMEDAENGAP
TPKKGRRGRKRKMRSRRDDDDSEEDNVEQDMDEEGEGEEDASLLQEEEEPESMELDQAPA
AIPVPAPDEPPVKRKRGRPPKNAPKPPTPSKSVRVAAKTTASAAAIIQVEDESTGAVENI
IVKKEEGDASAATPLEQAVALTVEGVGLDDEGVETVELAVNDETAAAAANGDLTPEMILS
MMDR
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgggccttcagagggtgtaggggtcgtggacgaccccaccaaagactttcca
tctatccaggctgttcacagccaggatgccatggtagctgacctccttcagcaagcagca
gaggccggaggtgtggtcgagggacaaggaggagttgtcttagaacaaggtcatggggaa
ggaatggtagcagccgcccagtcccagcagcagctgatggaagctggagttgaggttggt
gtagaaggtggagcaggagttgaaatgatggttatggactcactggatcccactctgtta
cagatgaagactgaggtgattgatgctgcagtaggggggtcatctgctacagtgggtgta
gttggaggagtagcaggtgctgcgcatcaagctactgtgacgacagtggaccagacacaa
atcatcaccttacaggtggtaaacatggaggaacaagcagctttgggccttggagagctc
cagctggttcaggtccctgtttctgccaccactgttgaggccctgcaacaaggcaccttt
gtagacacaactgcaatgccaaaagatggagacccagttatttgccacaccctgccactg
cctgagggctttcaggtagtcaaggttggtgctaatggggaggtagagacagtagagcag
gaggaggagggagtagtagctcaccctgaagaagaggaagatgaagaggtggggaaccag
ttactggaagaaggggaagatgagcccattcagcctcagaatgatgacacaaactgggct
aaagacccagactatcagcccccatctggaattgttaagaaaacaaaaaagggtaaaaag
agtcgtctgcgatacgctgaaggagacaaagatatggatgtcagtgtctatgactttgaa
gaggaacagcaggagggccttctgtctgaggtcaatgctgagaaagtggttggcaacatg
aaaccccccaaaccaacaaagatcaagaagaaaggagtaaagaagacgtttcaatgtgag
ctgtgtagctacacatgccctcgacgctccaacctggataggcacatgaagagccacacc
gacgaaagacctcataaatgtcacttgtgtggaagagcctttaggacggtgaccctgcta
cgaaaccatctcaacacacatacaggaactcgtccacacaagtgtacagattgtgatatg
gctttcgtgactagtggagagctggttcgtcatcgtcgatacaaacacacgcacgagaaa
cccttcaaatgctcaatgtgtgactatgccagtgttgaggtgagcaaactcaagcgtcac
attcgttcccacactggcgaacgtccattccagtgcagtctttgcagctacgctagcaga
gacacatataagctaaagagacacatgaggacacactcaggagagaaaccttacgagtgc
tatatctgccatgcccgattcacccagagcggaacaatgaagatgcacattttgcagaaa
cacactgagaatgtggccaagttccactgtccacactgtgacactgtcattgcacgcaag
agtgacttgggtgtccatcttcgcaaacagcactccttcattgagaccggaaagaagtgt
cgttactgtgatgctgtttttcacgagcgatatgctctgatccagcatcagaaatctcat
aagaatgaaaagaggttcaaatgcgacatgtgtgactactgttgtcgccaggagcgacac
atggtaatgcatcgtcgaacccacactggagagaaaccttatgcctgcagtcaatgtgaa
aagaccttcagacagaagcagctcctagacatgcacttcaagcgctaccatgaccccaac
tttgtccccactgcctttgtctgccccaagtgtagcaagaccttcactcgcagaaacacc
atggctcgccacgctgaaaactgcagcggtgagatggaggatgctgagaatggagctcca
accccaaagaaaggaaggagaggcagaaagaggaagatgaggagccgaagagatgatgat
gatagtgaggaggacaacgttgaacaggacatggatgaggaaggtgagggcgaagaagat
gcatcactgctacaggaggaagaggagccagaaagtatggaactggaccaggcccctgct
gccattccagtaccagctcctgatgagccaccagtgaagagaaaacgaggcagacccccc
aaaaatgcccctaaacctccaacacccagcaagtcagtcagagtggctgccaaaacaact
gcttctgctgctgccatcattcaggtggaggatgagagcaccggagcagtggagaacatc
atagtgaagaaggaggagggtgatgcttctgcagcaactcctctggaacaggcagtggcc
ctgactgtggagggggtggggctagatgatgaaggggtggagactgttgagctggctgtg
aatgatgaaactgcagcagcggctgctaatggagatctcacaccagagatgatcctcagc
atgatggaccggtga
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integrated database retrieval system
