Amphiprion ocellaris (clown anemonefish): 111575975
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Entry
111575975 CDS
T06018
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111575975 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111575975 (dhx8)
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111575975 (dhx8)
Spliceosome [BR:
aoce03041
]
Complex C
Other components
Step II factors
111575975 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
Flavi_DEAD
T2SSE
TsaE
PhoH
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
111575975
NCBI-ProteinID:
XP_023137207
Ensembl:
ENSAOCG00000006439
LinkDB
All DBs
Position
18:5025297..5046145
Genome browser
AA seq
1243 aa
AA seq
DB search
MAEHLQKCASGSGSCPHPICPPSSTFREQKHDSWRMADGGVDELSQLEYLSLVSKVCTEL
DNHLGISDKDLAEFVISLAEKQTSFDGFKALLVQNGAEFTDSLISNLLRLIQTMRPPSKA
STSKASEPKPKSEKDKLKEMFPALCRPNDPTPKRLLDEDDVKVAADAMKELEMFMPSVSG
TDSKGSKSKTEKSRRHSRSRSRSRDRDRHRDRDREKDRKRRHRSRSRSRSRSRDRDRHRE
RDRGKRRDKTSRWSDRSPSPRKDQDRDSDRWKDKHVDRPPPEEPSVGDIYNGKVTSIMQF
GCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDV
DQETGEDLNPNRRRNVGPDGGEEISMRNPDRPSNLNLGQAPELEQDDTLERKRLTKISDP
EKWEIKQMIAANVLSKEEFPDFDDETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSM
DMSPVKIVKNPDGSLSQAAMMQSALAKERRELKQAAREAEMDSIPMGLNKHWVDPLPDAD
GRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSILEQRESLPIYKLKEQLIQA
VHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCC
LGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDSELGQYAIIMLDEAHERTIHTDVL
FGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYL
DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP
SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT
PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGI
NDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV
HLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKF
SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAK
KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFS
PAFFKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacatctccagaaatgtgcaagcggaagcggaagttgcccgcatccaatatgt
ccgccgtcgtctacgttccgtgaacaaaaacacgactcgtggaggatggcagacggcgga
gtggacgagctttcgcagctggaatatttgtctttggtgtctaaagtgtgcacggagctc
gacaaccatctgggaataagtgacaaagatttagctgaatttgtcatcagcctcgcagaa
aaacaaacgagcttcgatggattcaaagctcttttggttcaaaatggagccgaattcaca
gattctctcatcagtaacctcctcaggctcatccagactatgcgacctccatccaaggca
tctacaagtaaagcctctgagccgaagccgaagtcagaaaaggacaagttgaaggagatg
tttcctgctctatgtcgaccaaatgacccaactccaaagaggcttctggatgaagatgat
gtgaaagtcgcagccgatgccatgaaggagctggaaatgtttatgcccagcgtcagcggg
acggactccaaaggcagcaagagcaagacagaaaaaagcaggcgacacagccgaagtcgc
agccgaagcagagacagagaccgacaccgagacagagatcgggagaaggacagaaagagg
cgacatcgctctcggtccagatccagatctcgctccagagaccgggaccgacacagagag
agagatcgtggcaaaagacgagacaaaacctcccgctggtccgatcgctcgccgagtccc
aggaaagaccaagacagagactctgaccgctggaaggacaaacatgtggatcggcctccg
ccagaggagccgtcggttggcgacatctacaacggaaaagtcaccagcatcatgcagttt
ggatgctttgttcagctggagggcctcaggaaacgctgggagggtttggtccacatttct
gagctgcgtcgggagggccgagtggccaacgtggccgatgttgtcagcaaaggacaaaga
gtcaaagtcaaggttctgtcgttcaccggctccaagaccagcctcagtatgaaggatgtg
gaccaggagacgggagaagacctgaaccccaacaggaggaggaacgtgggtccggacggt
ggcgaggaaatctccatgaggaaccctgaccggccgagcaacctgaacctgggtcaagcc
cctgagctggagcaggacgacactctggagcgcaagaggctcaccaagatctccgaccca
gagaagtgggagatcaaacagatgatcgctgccaatgtgctctccaaagaggaattccct
gattttgatgatgagacgggaattcttcctaaagttgatgatgaagaagatgaagacttg
gagatcgagctggtggaagaagaaccgccgttcctcagaggacacaccaaacagagcatg
gacatgagtcctgtcaagatcgtcaagaatccagacggctcgctgtcccaggcagccatg
atgcagagcgccttggcgaaggagagacgagagctgaagcaggcggcgcgtgaggctgag
atggactccatccccatgggcctgaacaaacactgggtcgacccgctgccagatgccgac
gggaggcagattgccgccaacatgaggggcattggtatgatgcctaacgacatcccagag
tggaagaagcatgcttttggagggaacaaggcctcgtacggaaagaagacgcagctctcc
atcctggagcagagggaaagtctgcccatctacaagctgaaggagcagctcattcaggct
gttcatgacaaccagatcctgatcgtcatcggagagacgggttccggtaaaaccacgcag
atcactcagtacctggccgaggccggctacaccaccagggggaagatcggctgtacgcag
ccccgacgtgttgccgccatgtcggtggccaaaagagtctctgaagagtatggatgttgt
ctgggacaggaggtgggctacaccatccgttttgaggactgcaccagtccagagacagtg
atcaagtacatgacggacggtatgctgctgagagagtgtttgatcgactctgagctgggc
cagtacgccatcatcatgttggacgaagcccacgagaggacgatccacaccgacgttctc
ttcggtctgctcaagaagaccgtccagaagcgcaccgacatgaagctgatcgtaacgtcg
gctacgttggatgccgtcaagttctctcagtatttctatgaagcgcccatcttcaccatc
ccaggaagaacgtatccagtggaggttctctacaccaaagaacctgagacagactacctg
gacgccagtctcatcaccgtcatgcagattcatctcactgagcctccaggtgacatcctg
gtgtttttaaccggtcaggaggagatcgacaccgcctgcgagatcctgtacgagaggatg
aagtcgctcggacccgacgttcccgaactgatcatcctgccggtttattccgctctgccc
agcgagatgcagaccaggatcttcgacccggcacccccaggcagcagaaaggtcgtcatt
gctacaaacattgcagagacgtctctgaccatcgatgggatctattatgttgtggatccc
ggctttgtcaagcagaaagtttacaactccaagaccggcatcgatcagctggtggtgact
cccatctcacaggctcaggccaagcagagggccggtcgcgccggcagaaccggacctggg
aagtgttacagactttacactgagagagcttacagagacgagatgctgaccacaaacgtt
cctgagatccagagaaccaacttggccagcactgtgctgtctctgaaggcgatgggaatc
aacgacctcctgtcctttgacttcatggacgctcctccgatggagactctgatcacagcc
atggagcagctctacaccctgggagccctggacgacgagggtttactcacccgcctgggg
aggaggatggctgagtttcctctggagccaatgttgtgtaagatgttgatcatgtcggtg
catctgggctgcagtgaggagatgctcaccatcgtgtcgatgctgtctgtgcagaacgtc
ttctacaggccgaaggacaagcaggccttggccgaccagaagaaggccaagttccaccaa
cctgaaggcgaccacctcaccctgctggccgtctacaactcctggaagaacaacaagttc
tccaacccctggtgctatgagaacttcatccaggctcgctcccttcgcagagctcaggac
atccgtaagcagatgctgggaatcatggaccggcacaagctggacgtggtgtcctgcggt
aaagccacggtgagagtccagaaagccatctgcagcggtttcttcaggaacgcagccaag
aaggatcctcaggaaggttacagaaccctgatagaccagcaggtggtgtacatccaccca
tccagcgccctgttcaaccggcaacctgagtgggttgtctatcacgagctggttctgacc
actaaggagtacatgcgtgaggtgaccaccatcgaccctcgctggctggtggagttctct
ccggccttcttcaaagtgtccgacccgacgcgcctcagcaagcagaagaagcagcagcgc
ctggagccgctgtacaaccgctacgaggagcccaacgcctggaggatctccagagccttc
agacgccgctaa
DBGET
integrated database retrieval system
