Amphiprion ocellaris (clown anemonefish): 111576125
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Entry
111576125 CDS
T06018
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03082
ATP-dependent chromatin remodeling
aoce03083
Polycomb repressive complex
aoce04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111576125 (rbbp4)
03083 Polycomb repressive complex
111576125 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
111576125 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoce03036
]
111576125 (rbbp4)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111576125 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
111576125 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
111576125 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111576125 (rbbp4)
PRC2.2
111576125 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111576125 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
111576125 (rbbp4)
Chromatin remodeling factors
NuRD complex
111576125 (rbbp4)
NuRF complex
111576125 (rbbp4)
NuRF complex (fruit fly)
111576125 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
111576125
NCBI-ProteinID:
XP_023137426
Ensembl:
ENSAOCG00000003378
LinkDB
All DBs
Position
15:15477948..15484464
Genome browser
AA seq
425 aa
AA seq
DB search
MADKEGGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDTSHYDSEKGEFGGFGSVSGKIDIEI
KINHEGEVNRARYMPQNPCIIGTKTPTSDVLVFDYTKHPSKPDASGECHPDLRLRGHQKE
GYGLSWNPNLSGSLLSASDDHTICLWDISAAPKEGKIVDAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGTTD
PEATG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagaaggtggtgcatttgatgatgccgtggaggagagagtgatcaatgag
gaatacaagatctggaagaaaaacactcccttcctgtatgacctggttatgacccatgcc
ttagagtggcccagcctcactgctcagtggctgcctgatgtctcaaggccagaggggaag
gattacagtgtgcatagactggtgctgggcactcacacatctgatgagcagaatcacctg
gttattgcaagcgtccagctgcccaatgatgatgcccagtttgacacctcgcattatgac
agtgaaaaaggagagtttggaggctttggctcagtgagtggcaagattgatatagaaatc
aagatcaaccatgaaggagaggtgaaccgtgcccgctatatgccccagaacccctgcatc
attggcactaagactcccacctcagatgtgttggtgtttgactacaccaaacatccctcc
aaaccagatgcttctggagagtgtcaccctgatttgcgtcttagaggccatcagaaagaa
ggctatggtctctcatggaatccaaatctgtcaggctctctcctgagtgcatcagatgac
catacaatctgcctgtgggacatcagtgctgcaccaaaggagggcaagatagttgacgca
aagaccattttcaccggtcatactgctgtggtggaagacgtctcttggcacctgcttcac
gagtcactctttggatcagtagcagatgaccagaagctaatgatctgggatactcgttca
aacaatacctccaaacccagccatgcagtcgatgcccacacagcagaggtcaactgtttg
tcatttaacccttacagtgagttcattcttgccactggctcagcggacaagactgtggct
ctttgggatttgagaaacctgaaactgaagctgcattcctttgagtctcacaaggatgag
atcttccaggttcagtggtcccctcataacgaaaccatactggcatccagcggaacagac
cgtcgcctcaatgtctgggacctcagtaaaattggagaggagcagtctccagaagatgca
gaggatggtccgcctgagttactgtttatccatggaggccacacggccaagatctcggac
ttctcctggaaccccaatgagccctgggttatctgttccgtgtctgaagacaacattatg
caagtctggcaaatggcggagaatatctacaatgatgaagatcctgagggtacaacagac
cctgaagccacaggctaa
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