Amphiprion ocellaris (clown anemonefish): 111576201
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Entry
111576201 CDS
T06018
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aoce03009
]
111576201 (ddx21)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111576201 (ddx21)
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111576201 (ddx21)
Ribosome biogenesis [BR:
aoce03009
]
Eukaryotic type
Pre-60S particles
Helicases
111576201 (ddx21)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
111576201 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
111576201
NCBI-ProteinID:
XP_023137536
Ensembl:
ENSAOCG00000023174
LinkDB
All DBs
Position
1:complement(15957354..15967762)
Genome browser
AA seq
804 aa
AA seq
DB search
YSLVAHRQLSPKKTKRLAREHAARSLARSFLAACPWVCLCVYAEGLQPGREMPSKVIFET
EEQVMEDNMDTAAEGKLLKNKTKEDKKLKKKKQQQQQLEEQEDPDCGPPAPKKKKKKDKL
AADQVNGHIDEATDVNGNSNGVETPKKKSKKNTEGEKEKTKKKEKKAIAEAATNGHSTPN
TPVQTPIQTPSQSSDDSASDSEKEKEETPEQREGAFSNFRISQVTIDKLKARGVSYLFDI
QVKTFNPVYDGEDVIAQARTGTGKTFSFAIPLVEKLQKESAEKTRGRPPKVLVLAPTREL
AIQVAKDFKDVSKRLSIACFYGGSSYNPQIDAIRNGIDILVGTPGRIKDHIQNNKLNLTK
LKHVVLDEVDQMLDMGFAEQVEEILGSSYKKDCDTNPQTLLFSATCPPWVYDVAKKYMRP
ACKHVDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVIQVYSGSHGRTIIFCETKKEAN
ELSMNTSIKQSTQSLHGDIPQKQREMTLKGFRNGLFEVLVATNVAARGLDIPEVDLVVQC
SPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEDQLRYVENKACITFRRVGVPTANDII
KSSSKDAVKFLDSVPVAAIEYFRESAEKLIEARGAVDALAAALAHISGATSLEQRSLLNS
DAGFTTMQLVCSQEMHGLGYAWKSIREQLGEEIENHIHRMTFLKGKTGVCFDVPADKVKE
FQDNWKDGRRWQLTVATELPELEEKQFSNRGDRGFGNRGDRGGFRGGRGRSFRGNGGRGN
GFRSGGYGNNRGGHKRSFSQAFDS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
tattcgttggtagctcaccgccaattatccccaaagaagacgaagcgcctggctcgtgaa
cacgctgcacgctccctggcgcgttcttttctagccgcgtgcccgtgggtttgcctgtgt
gtctacgctgagggactccaaccgggaagagaaatgccgtcaaaagtcatctttgaaacc
gaggaacaagtaatggaagacaacatggatactgccgccgagggtaaactcctgaagaac
aagaccaaggaggacaagaagctgaagaagaagaaacagcagcagcagcagttggaggag
caggaggacccagactgtggccctccggcaccaaagaagaaaaagaaaaaagacaagctg
gcagcggaccaagtgaacggccatatcgatgaggccacagacgtgaatggtaacagtaat
ggtgtcgaaacaccaaagaagaagagtaagaagaacacagaaggagagaaagagaagacc
aagaagaaggaaaagaaagcaattgcagaagcagcaaccaatggacattccaccccaaac
accccagttcagactcccatccagacaccgtcccagtcaagtgatgactcagccagtgac
agcgaaaaagagaaagaggagacaccggagcagagagaaggggcattctccaactttaga
atctcccaagtcactattgataagctaaaagctcggggagtctcttacctgtttgacatt
caggtcaagacatttaatcctgtgtatgatggagaggatgtaattgcccaggccagaacc
ggaacaggaaagactttctcctttgctatccctttggtggagaagctccagaaggagtca
gcagagaagacaagaggccgacctcccaaggtcctggtgttggctccaaccagagagtta
gctatccaggtcgctaaggacttcaaagacgtctccaagaggttgtctattgcctgtttc
tatggaggcagctcgtacaatccacagatcgatgccatccgcaatggtattgatattttg
gttggaacccctggtcgcatcaaagaccacatccagaacaataagctcaacctcactaaa
ctgaaacacgtcgttctggatgaagtagaccagatgctggacatgggatttgcagagcag
gtcgaggagattttgggttcatcatataagaaagactgtgacaccaacccacagactctt
ctgttctcggccacctgccccccttgggtgtatgatgtggccaagaaatacatgagacca
gcgtgcaaacatgttgacctgattggcaagaaaacgcagaaagctgcaacaactgtggaa
cacctggccatagcgtgtcactggtcacagcgtgcggcggtgatcggcgatgtgatccag
gtctacagtggcagccatggaagaaccatcatcttctgtgagacaaaaaaagaagccaat
gaactttccatgaatacatccatcaaacagagtacccagtccctccatggcgatattcca
cagaaacagagagagatgacactaaagggcttcaggaatggactctttgaggttctcgtt
gccacaaatgttgcagctcgtggattagacatccctgaagtcgacttggttgtccagtgt
tctccacccaaggatgtggagtcatatatccatcgttcaggacgtacaggccgagcaggc
aggactggaatctgcatctgcttctaccaaaggaaagaagaggaccagctgcgctatgta
gaaaacaaagcatgcatcacattcaggcgtgttggtgttcccactgcaaatgatatcatc
aagtcatcaagcaaagatgctgtcaagtttctggactccgttccagtcgcagctattgag
tatttcagagaatcagctgaaaagctgatcgaggcgagaggagcggttgatgcactagct
gctgccctggcccacatttctggagccacaagtctagagcagaggtcactgctcaactct
gacgctgggttcaccacgatgcaattggtgtgttcccaggagatgcacggtctgggttac
gcttggaagagcatccgcgaacagctaggagaagaaatcgagaaccacattcacagaatg
accttcctcaaaggcaaaacaggagtttgttttgatgtcccagctgataaagtcaaggag
tttcaggacaactggaaggatggtcgccgttggcaactgactgtagccacagagctccca
gagctggaggagaagcagttcagtaaccgcggtgacagaggcttcggtaaccgtggtgac
agaggagggttcagaggtggaaggggacgaagctttaggggaaatggtggccgtggcaac
gggttccggagcggtggctatggcaacaacagaggaggacacaaacgcagcttcagccaa
gcttttgattcctga
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