Amphiprion ocellaris (clown anemonefish): 111576229
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Entry
111576229 CDS
T06018
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04270
Vascular smooth muscle contraction
aoce04625
C-type lectin receptor signaling pathway
aoce04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111576229 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
111576229 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
111576229 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111576229 (arhgef12a)
Membrane trafficking [BR:
aoce04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111576229 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
111576229
NCBI-ProteinID:
XP_023137582
Ensembl:
ENSAOCG00000021571
LinkDB
All DBs
Position
7:6668063..6706297
Genome browser
AA seq
1436 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDKKPKSDKTSLPSNEFDPTEALVVQKSGSSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLPEAEPEMLGVSISSPNSPAA
ERPYSPQDRLSSAHSPWDENSVCNQKADILQKMLSKEQQELQAMKEEYSRNPSPKLLKDI
QEAKKHIPQLQGQLFRVTGTTQEAVPGGDADDGSMLETERTFAMKGDNSTDLSWTSSPIS
RIFGPGSPDSQCPRDSSCPSPKSTPRNSFNSCHSPETEDTTDLDSLSPTTVSSPSSSRLV
SQIIGAEDDYFDSDQEQTNGQCNSFNTIEQLKSRPAHLAAFLHHVISQFDPAPVLCYLYA
DLYKQTNSKETRRVFMDLHTFFIDRGANLKVAVPESVSSDLDRRRTELIPEEINRQHVQT
LQDSLLPDIQRNLEDFRQKRSMGLTVAEVELARLDQERVRDRVTLERERSYAENIITKIE
DILLTTQTAEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRISFLPKIKKSIKTEKE
GEEKVKKPRFPSILGPQRRPSRNEAASVSKALDGRPRPQKQLSQPTLGASEHMETGHLRG
SQSSEGSELTHSMSVNASSPNSAFYSTESSRDADIGGTPTSGPSRLSDGLQSDPLDGFSS
HFDLYSLDQLQEDDRESDRAHEGTPKAIRRLEGLGAADVQSEDDQGTDSEHDPPNWQQLV
GREVLAGLRPHEIKRQEVINELFYTERAHVRMLKVLDHVFYQKLSKEAILPPADIKNIFT
NLEEILQLHVSILEQMAAVRKRNESSVIDQIGDDLLSWFGSGEEEKIKQAVGTFCSNQPF
ALEIIKTKKKDSRFTSFIQEAESNRLCRRLQLKDLIPIEMQRLTKYPLLLDNIVKYTDNA
VEKDKVKQAADCCRKILSHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILELKNLD
LTKRTMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLAGTADTKH
IFSPIIKLNTVLVRSVATDNKSFFVLSMSDNGAQIYELMAPTVSDQRTWQRLITQRADAM
KVKPHSVIPLPQTDGERDGVEIITAGVSRLSRDPDRTSTGSTQSTDKESGPACRSALQTS
LPGSNPFEGVKAEEEEEEGFVDPELPYQVAEDGREGDSFSMFPLRADEALKTLAALKQVL
VTQLMSQEAAEQTKRSTGARLLRTTSLRTPIDSRARVMVHNGSEKNSSQTEDLAQDLGSG
DTGFFDSPEDYAGYLVLEGYGGPGESSTDDDILASTTGKQLRTSQGCAADSGINLRFSST
SQAGSLSSFSRQVLSHLRNLQANLNYLKEVEAKYNNLIHQRPERSAADTDGNKDKR
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaaacagaaccagc
agcattctcagtaaagaccaccccccggacaagaaacccaaaagtgacaaaacctcactt
ccctccaatgagtttgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctagcagaagggaagcctgagtcctgtggtctggtccaacgatgtgtaatcatccag
aaagatgaaaatggctttgggctcactgtcagcggtgacaacccagtgtttgtgcagctt
gtcaaagaagatggggctgctatgcgggcaggtgttcagacaggagacaggatcatcaag
gttaacgggacccttgttacacattctaatcacattgaagtggtgaaacttatcaaatcg
ggctcctatgtggcccttacagtgttggggcgccccccagggcttgcccagatccctttg
cctgaagcagagcctgaaatgttgggcgttagcatatcctctccaaactccccagcagca
gagcgtccctacagtcctcaggaccgcctctcctctgcacattcaccatgggatgagaac
agtgtctgcaaccagaaggctgacatcttgcagaagatgctctctaaagagcagcaggag
ctacaggccatgaaggaggaatacagcaggaacccctcccccaaactactgaaagacatc
caggaagctaaaaaacacattcctcagctgcagggtcagcttttcagggtcactgggaca
acacaggaggctgttccaggtggtgatgcagatgatggtagcatgttggagacagagcgt
acttttgccatgaaaggagacaacagtacagacctgtcctggaccagcagtcctatatct
cgcatatttgggcctggatctccagatagccagtgtcccagagattcctcctgccccagc
ccaaagagcacacccaggaacagcttcaactcctgccactccccagagactgaggacacc
accgatctggactctctatctcccactacagtcagcagtccctcctcttctcgccttgtc
tcccaaatcattggagctgaagatgactattttgattcagaccaggagcagacaaatggc
cagtgtaacagctttaacactattgagcagctcaagtctcgccctgcccacctcgcagcc
ttcctgcatcacgtcatctctcagttcgatcccgctcctgtgctgtgctacctctatgct
gacctctacaaacagaccaactccaaagagaccagacgggtgttcatggacctccacacc
ttcttcattgaccggggagcaaatttaaaagttgcagttcctgaatctgtctcttctgat
ctcgatcggaggcggacagagctgatcccagaggaaataaacaggcaacatgttcaaaca
ctgcaggactctctgctccctgacattcagagaaaccttgaggattttaggcagaagcgc
agtatgggcctaacagtggctgaagtagagctggccagactggaccaagagagagtcaga
gaccgggtcactctcgagcgggaacgctcatatgctgaaaacatcatcaccaagatagaa
gatatcctgttaactactcaaaccgcagaggaagagaaatgcactacaatgcagtatgtt
atctatacatacatgaagcaccttggtgtgagggtcaaggaacctcgcagtctggagtcc
aaacgggttcgaattagctttcttcccaagattaagaaaagcatcaagacagaaaaggag
ggagaagagaaagtgaaaaagcccaggtttcctagtatccttggccctcagcgtcggccc
agccgcaatgaggcagcctcagtgagtaaagccctggacggccgtccccggcctcagaaa
cagttgtctcagcctacactgggggcaagtgagcacatggaaactgggcatctaagaggc
agccagtctagcgagggctctgagctcacacactccatgtctgtcaatgcctcatctcca
aacagcgccttctacagcactgagtctagtcgagatgctgatattggtgggactcccacc
tctggcccttccaggctgagtgacggccttcagtctgaccccttggatgggttttcttcg
cactttgacctgtacagcctggaccaactgcaagaggatgacagagaaagtgacagagct
catgagggaacaccaaaggccataagaaggctcgagggactgggtgcagctgatgtccag
agtgaggacgaccaggggacagattcagagcatgatcctccaaactggcagcagctggtg
gggcgagaggtcctagcgggtctcaggcctcatgaaatcaagagacaggaagttatcaat
gagctgttttacacggagcgtgcacatgtgcggatgctgaaggttttggaccacgttttc
taccagaagctctccaaagaggccatcctgcctcctgctgacattaagaacatctttacc
aacctggaggagattttacagctgcatgtttcaatacttgagcaaatggctgccgttcgg
aagagaaatgaatcttcagtaattgatcagataggagacgacttgctctcttggtttggc
agcggagaggaagagaagatcaagcaggcagtggggaccttctgtagtaaccagcctttt
gctctggaaatcataaagaccaagaagaaagactcacgattcacctcgttcattcaggag
gcagagagtaacagactgtgtcgcagactgcagcttaaggacctcattcctatagagatg
cagcgtctcaccaagtatcccctgctactagacaacatcgtcaagtacacagacaatgca
gtggagaaagataaagttaagcaggcagcagactgctgtagaaagatcctcagtcacgtc
aaccaggctgtgaaggaatctgaggacaagcagaggttggaagactatcagaggagattg
gacctctcctctctaaagcagacagacaaccccatgatcctggaactaaagaacttggat
ctaacaaagagaacgatggtgcatgagggtccactgtcatggaaagtgaacaaggacaag
actattgagttgtacacactcctcctggaggacatcctggttctgctacagaaacaagat
gagcgtctgatcctgaagtgtcacagcaaaaacctggcgggcactgctgataccaaacat
atcttcagccccatcatcaaactgaacactgtgctggtgcgctccgtggctacagacaac
aagtccttcttcgttctatccatgtcagacaacggtgcccagatctatgagctaatggca
cccacagtctcagatcagagaacgtggcagcgtctaatcacccagagagctgatgccatg
aaagtcaagcctcacagcgttatcccattacctcagaccgacggtgagagagacggcgtg
gagataattacagcaggtgtttccaggttgagtagagacccagaccgcacatccaccggc
agcacccagtccacagataaagagagtggtccagcttgtagaagtgcattgcagacttct
ctgcctggtagtaatccgtttgagggagtgaaggcagaggaggaggaggaagaaggcttt
gtggacccggagcttccttatcaagtggctgaggatggcagagaaggagactcgttcagc
atgtttcccttgagggcagacgaagcactgaaaacattggcagcattaaagcaggtgttg
gtgacccagctgatgtcccaggaggcagcagaacaaaccaaacgctcaacgggggcccgt
ctcctcaggaccacatctctgcgaacgcccatagacagccgtgcacgagtgatggtccac
aacggctcagagaaaaacagttcccagacagaggacttggctcaggacctgggctctggg
gacaccggcttctttgattcacctgaagattatgcaggatatttggtcctggagggttac
ggtggcccaggagagagcagcacagatgacgacatcttagcgtcaaccacagggaagcag
ctgagaacctcacagggctgcgctgccgactctggcatcaatttgagattttcctcaaca
tcacaggctggcagcctctcctctttcagcagacaggtcctgtctcatcttagaaatctt
caagccaacctcaactatctgaaggaggttgaggctaagtacaataatctaatacaccaa
aggccagagaggtcagcagcagacacagatggaaacaaagataagagatag
DBGET
integrated database retrieval system
