Amphiprion ocellaris (clown anemonefish): 111576336
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Entry
111576336 CDS
T06018
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04110
Cell cycle
aoce04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111576336 (smc1b)
04114 Oocyte meiosis
111576336 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoce03036
]
111576336 (smc1b)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111576336 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
111576336 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
111576336
NCBI-ProteinID:
XP_023137717
Ensembl:
ENSAOCG00000001851
LinkDB
All DBs
Position
3:20711418..20729348
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AA seq
1248 aa
AA seq
DB search
MSYLKQIEVENFKSWRGKQVIGPFMRFNCIIGTNGSGKSNVMDAVSFAMGERAAALRVKH
PEDLIHGAHIGQPVSDTASVAIRFCDDEDQETVFSRTISEASSEYRINGVRLTLAEYTEE
LQKIGIVTKAQNCLVFQGAVESIALKDPKERTKMLECISQSKEFATEYHKKKEALLKATE
DTQFHFNKKKSVIVERNLVSQEKFEAERYQELLDELQQNRMQLTLAELYHNEKGITASSD
TLRDRQHAAAAKNETLVNSEQTVKTQKKEHGRHMREQQHIEKEIRTQEHILTQSRSQYVK
AKVNTSHHMKKAEEARCSLKKSQKLLTIKEQELAEDRQEIVELERTWKNYEKQVREQEAT
QRRDIELDEDQLERYKELKELARKQGAVLRQQEEKLHWEVRADCEKMAFDKRRHKEVEVS
IRNNQTQLEDLTHRAEKLEEYTKTCMSSLEDYRQREERLSAELQQGSQRSEEVNQELNQV
MEELGNARLDRQESKRQLQRKEVLEKLRRLYPKTVYGRLSGLCNPIHKMYLLAVTKVFGR
YMNAIVVASEKVALDCITFIKEERAEPETFLPIDYLVVNPLNERLREMPGAKMVVDVVQV
HPGIAAAQLRRVVQFVCGNALVCETIKEARSMAFDRHERFKTVSLDGTLFAKSGTISGGS
SDLRSKARCWDEKDMMHLKERKDQLVIELHDLMRLKRKESDLRQIIVEAQGAQTRLKYSK
AELENLRKKVIVKCQAEISQMKSELANLSCQIQMQHESVEAKNEEIKAIRDQIDQMEDLV
FSDFCADIGMDNIREYEQEHLKQQAELDNKRLEFEIQHGRLTARMEYEQHQMEQLRKKLC
KMEDTINEEERTMAEERKDEMRLLEVVEEGQNKLLELNNQLLSKKSQVAAVKAELDQKNQ
SLQQINKELVKLQREVMSAETALEQKRLTRHNMLLACKIQDLPITLLSGSLNEISDVQLE
TDSESTSVTMDVYEREAHLVIDYSELEAELRGLQAEEEVEAYLTRLSETVLSIEGVLNRT
AAPNLKALQKMREIKDKLQGMTEAFDASTKAARKCSQEFEQVKAQRFQLFSQCFEHVSVV
IDQIYKRICRNSSAQAILSAENPDEPYLGGISYNCVAPGKRFMSMENLSGGEKAIAALAF
IFAIHSFRPAPFFILDEVDAALDNSNIGKVTSFIREESKDNMQIIIISLKQEFFSRADAL
LGVYSTFDECMFSRILTLDLRPYPLVEEERDTDQESTPQGSCSLESHA
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgagttacctgaaacaaattgaggttgaaaactttaagtcatggcggggaaagcaagtt
atcggtccgttcatgcggtttaactgcataattggcacaaatggctccggcaagtcaaat
gtgatggatgccgtgagcttcgctatgggggagcgggccgccgctctccgagtgaagcac
cccgaggacctgatccacggagcccacatcgggcagccagtgtcggacaccgccagtgtg
gccatacggttctgcgacgacgaggaccaagagactgtcttcagtcggaccatcagtgag
gcctcctctgagtatcggatcaatggtgtacgtctgactttggccgaatacacggaggag
ctccaaaagattggtatagtgaccaaagctcaaaactgtctggtgttccagggggcagtg
gagtccatagctttgaaggacccaaaggagaggaccaagatgttggagtgcatcagtcaa
tccaaggaattcgctacagaataccacaagaagaaagaggctctgctgaaggccacagag
gatacacagtttcacttcaacaagaaaaagtctgtcatcgttgagaggaacctggtctca
caggaaaaatttgaggccgagagatatcaggaattgttggatgagcttcaacaaaaccgt
atgcagctgactctggctgagctctaccataatgaaaaaggcatcacagcttccagtgac
accctgagggacagacagcacgcagcagctgctaagaatgagacactggtaaactcagaa
cagacggtcaaaacccaaaagaaggaacatggtcgccacatgagagagcagcagcacatt
gagaaggagatccgaacacaggagcatatcctaacccagtctcggtcccagtatgtcaaa
gccaaagtgaacacctctcatcacatgaagaaggctgaggaggcccgttgcagcctaaag
aagagtcagaagctgttgactattaaagagcaggagctggcagaagatcggcaggaaatt
gttgaacttgaaagaacctggaagaattatgagaagcaggtcagagaacaggaagctacc
cagaggagagacattgagctggatgaggatcagttggagcgatataaggagctgaaggag
ctggcccgaaagcagggggctgtcctcagacagcaggaagaaaaacttcactgggaggtg
agagcggactgcgaaaagatggctttcgacaagcgcagacataaggaagtagaggtttcc
atcaggaacaatcaaactcaactggaagatttgacacacagagcagagaagctagaggag
tacaccaagacctgcatgtcgtcccttgaggactaccgtcagcgggaggagaggctgagt
gcagagctgcagcaaggtagtcaacgtagcgaggaggtgaaccaggagctgaaccaggtg
atggaggagctgggtaacgcccgtctggacaggcaggagagcaaacggcagctgcagcgc
aaggaggtgctcgagaagcttcgcaggctctaccccaagactgtgtatggccgactgtct
ggcctgtgcaaccctatccataagatgtacctgctggctgtcactaaggtgtttggccgc
tacatgaatgcaatcgtggtggcatcagagaaagtagcccttgactgcatcactttcatc
aaggaggagagagctgaacctgagacattcttgcctattgactacttggtggtgaatcct
ttgaatgagcgactgagggagatgcctggtgccaagatggttgtggatgttgtacaagtt
catcctggcatagctgccgcccagctgaggagagtggtgcagtttgtctgtggcaatgcc
ctggtgtgtgaaaccattaaagaagccaggagtatggcttttgacagacatgaacgcttc
aagacagtttctctggatggaacattgtttgcaaaatcaggtacaatctctggaggatcc
agtgacctgcgcagcaaagctcgctgctgggatgagaaggacatgatgcatctgaaggaa
cgcaaggaccagttggtcattgagttacatgacttaatgaggttgaagagaaaggagtca
gacctgagacagatcattgtggaggctcagggagctcagacccgtctgaaatactctaaa
gctgagttggaaaaccttaggaagaaagtcattgttaaatgccaagcggagatttctcaa
atgaaaagtgaattagcaaacctgagctgtcagattcagatgcagcatgagagtgtggag
gccaagaatgaagagataaaagcgattagagaccagattgaccagatggaggacttggtt
ttttcagacttctgtgctgatattggcatggacaacatcagggagtatgagcaggagcac
ttgaaacagcaggcagagcttgataataaaaggctggagtttgagattcagcacggccgc
ctgactgcacggatggaatatgaacaacaccaaatggagcagctgaggaagaagctctgc
aaaatggaggataccatcaatgaggaggaaagaaccatggctgaggagagaaaagatgag
atgaggctgttggaggtggtggaggagggtcagaataagctactggagctgaacaaccag
ctgctctctaagaaaagccaggtggctgctgtcaaagctgagctggaccagaaaaatcaa
agccttcagcagattaacaaagagttggtgaagcttcagcgagaggtgatgtctgcagag
actgccttggagcagaaacgcttgactagacataacatgctgctggcctgtaagatccag
gacctgcccatcactctgctgtcagggagcctgaatgaaatcagtgatgtgcagctggag
acagactctgaaagcacttcagtcactatggacgtctatgagagagaggcacatctagtc
attgactactctgaactagaggcagagctcaggggtctgcaggctgaagaggaggttgag
gcctacctgacgagactgagtgaaacagtgctctccatagagggagtgttaaatcgcacc
gccgcacccaacctgaaggctctgcagaaaatgagggagatcaaggacaagttacaggga
atgacagaagcctttgatgccagcactaaagcagccaggaagtgtagtcaggagtttgag
caagtaaaagcccagcgcttccagctcttcagccagtgctttgagcatgtgtctgttgta
attgaccaaatctataaaagaatatgcaggaacagcagtgcacaggccattctgagtgca
gagaatccagatgaaccatacttgggtggcatcagctacaactgtgtggcaccagggaaa
cgcttcatgtccatggagaatctgtctggtggagaaaaggcaatcgctgctctagctttc
atatttgccattcacagcttccgacctgcacctttcttcatcttggatgaggtggatgca
gccctggacaactctaacattggcaaggtgaccagtttcatcagagaggagtccaaggac
aacatgcagatcatcatcatctccctgaagcaggagtttttctcccgggcagacgcactg
ctgggagtctattcaacttttgatgaatgcatgttcagtcgcattctgaccttggacctg
cgcccctaccctctggttgaagaggaacgggacacagaccaggagagcacaccacagggt
tcttgtagcctggaatcacatgcatga
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