Amphiprion ocellaris (clown anemonefish): 111576371
Help
Entry
111576371 CDS
T06018
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111576371 (si:ch211-114c17.1)
Spliceosome [BR:
aoce03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111576371 (si:ch211-114c17.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_12
TPR_MalT
HrpB1_HrpK
HAT
RsmJ
Motif
Other DBs
NCBI-GeneID:
111576371
NCBI-ProteinID:
XP_023137776
Ensembl:
ENSAOCG00000016377
UniProt:
A0AAQ5ZE69
LinkDB
All DBs
Position
13:16367630..16377185
Genome browser
AA seq
727 aa
AA seq
DB search
MAAEGCEEMSGNGELEDSPAMDASEVPPPPPTEMSEMSEENGSAAVAPEVPVGPDPASFS
VPPAAEDEEGELPADFERLWKAAHDNPQDFTSWTDLLQYCEQESHVTASRRSLEAFLIRY
PLCYGYWKKFADLERRAGFNDKAEEVCIQGLQSIPLSVDLWIHYINLLLGTLDMNLPESP
KRIRSVFEDAIAAAGLDFHSDRLWDLYVEWEKEQGNMKNAAAVLDRVLKVPTQLYNTHYD
KFKEHLNGHEPKEVLSSEEYEELRTMCRQNQKAERAEQAQEEEEERPPGEEEPATPEGTD
SEELMQKIREQVLVRRDKVYQDNEGEVRKRWHFEDAIKRPYFHVKPLDRLQLRSWHSYLD
WEIAQLNADTKDPSQDPNQAATEGSEVTTQPQEASEDPAVAQDDHRVRILFERCLIACAL
YEEFWIRYIQYLEPQSVDEARAVYKRACEVHLAYKPNIHMQWATFEERHGDLTEARRVLE
ALEKTLPGLAVVRLRRAALERRAGQLDQSEALLREAVAESKEKPTLHAFYSIKLARLLLK
LGRNPSRARRVLQDALEISPDNDKLHMNLLELEVSGEPWTSAEAVQECVTRALAAPLAPH
TKIMFSQRGLQFVEDYSNSIQSVLSVYEEHQKLLNELGGTKRGAENGDEPDDPEKLSKSE
DGSAVAVSAPPTMPHVPITTPPPNMMGTDMSAQAGYGAYSNWYQQPQYGSYGYQNTWNYN
QGYYPPS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggatgtgaggagatgagcggcaacggggagctcgaagattctccagcc
atggatgcctctgaggttccaccaccacctccgactgagatgtcagagatgtcggaggag
aacggcagcgctgctgtggcccctgaggttcctgtaggccccgaccctgcttccttctcc
gttcctccagctgcagaggacgaggagggggaactacctgcagactttgagcgtctgtgg
aaagctgctcatgacaatcctcaagacttcaccagctggaccgatctgctgcaatactgc
gaacaagagagtcacgtcacagcttctcgcagatcgctagaggccttcctcattcgctat
ccgctttgctatggctactggaagaaatttgcagatctggagcgccgggcaggattcaac
gacaaagcagaggaggtgtgtattcagggtcttcagtcaatccctctgagtgtagatctg
tggattcactacatcaatctgctgttgggaacgctggacatgaacctgcccgagtcgcca
aagcggattcgcagtgtgtttgaggatgcaattgcggcagcaggtctggactttcactct
gatcggctttgggatctgtatgttgagtgggagaaggagcagggcaacatgaagaacgca
gcagccgtcctggacagagtcctcaaagtccccactcagctttacaacacccactacgac
aagtttaaggaacacctaaacggccacgagcctaaagaggtgctttcttcagaggagtac
gaggagctgaggacgatgtgccgtcagaatcagaaggccgaacgagccgaacaggcccag
gaggaggaggaggagaggccgccaggggaggaagaacctgccacacccgagggtacagac
agtgaggaattgatgcagaagattagggaacaagtgctggttcgcagggacaaagtttac
caggacaacgagggagaagttcgcaagagatggcactttgaagacgctatcaagcggcca
tacttccatgtgaagccacttgaccgcctccagctccggtcctggcactcctacctggac
tgggagatcgctcagctgaacgcagacaccaaagaccccagccaagatccaaaccaagca
gccacagaggggtcagaggtcacgacccagcctcaggaggcatcagaagatcctgcggtt
gcccaggacgaccaccgagttcgcattctctttgagcgctgcctaattgcctgtgcgctg
tatgaggagttctggatcaggtacattcagtatctggagccgcagagtgtggacgaggct
cgggctgtttataaacgagcctgtgaggtccacctggcttacaaacccaacatccacatg
caatgggccaccttcgaagagaggcacggtgacttaactgaggctcggcgagtgttggaa
gccctggagaaaactctgccaggcttggcggttgtccgtctccgcagagccgctttagag
agacgagcgggccagctggaccaatcagaggccttgctgagggaggcggtggcagaatcc
aaagagaagcccacgttacacgctttctactccatcaagttggctcgtttgctgctgaaa
ctgggcagaaaccccagcagagcccgcagggttttacaggacgcgctggaaattagtccg
gataacgataaactgcacatgaacctgttggagctggaggtgtcgggggaaccctggacg
tcagcggaggcggtgcaggagtgtgtgacgcgagccctggcagctccactcgccccacac
accaagatcatgttctcacaaagaggcctgcagtttgtagaagactacagcaactctatc
cagagtgtgctgtcggtatatgaggagcaccagaagctgctgaacgagctgggaggaacc
aagagaggagcagagaacggggacgaaccagacgatccagaaaaactgagcaaaagtgaa
gacggttctgctgtcgctgtgtctgcacctcccactatgccacacgtccccatcaccacg
cctcctccaaacatgatgggcaccgacatgagcgcacaggccggctacggagcatacagc
aactggtaccagcaaccacagtacggcagctacggctaccagaacacctggaactacaac
cagggctactatccacccagctaa
DBGET
integrated database retrieval system
