Amphiprion ocellaris (clown anemonefish): 111576481
Help
Entry
111576481 CDS
T06018
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111576481 (ssrp1a)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111576481 (ssrp1a)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
111576481 (ssrp1a)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
111576481 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
DUF7493
Motif
Other DBs
NCBI-GeneID:
111576481
NCBI-ProteinID:
XP_035809603
Ensembl:
ENSAOCG00000010924
UniProt:
A0AAQ5WZA2
LinkDB
All DBs
Position
13:complement(17896509..17910347)
Genome browser
AA seq
705 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPAGELNMAQWRRVCLGH
GIKLGTSTGHIYKYDGFRDTDFEKISEFFKANYKLDLTEKDMCVKGWNWGTAKFSGPLLS
FDVNDSTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQADERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMSEEDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDDSDGGSDES
FNPGEEDDDIAEEYDSNASASDSSDEGDESEDESAKKKKVKKAKVVKEKKERKPRKEKKQ
KDSGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDEKEEWETKAG
EAKRQYDKAKKEYKESGGGSTSSSKKESKKSGGKKDEKKRKSAGGDKDRERGGGNDSFKS
KEFIETSEESSSDSDHKSKSKRKKESEEEEEEAVSTPASSEEESD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgctggagtttaacgagatctaccaggaagttaaaggctcctggaatgat
gggcgactgcgtttcagcaagcaaaatgtggtttacaagagcagcaagacggggaaggtg
gacagcatcccagctggcgagctcaacatggcccagtggagacgagtgtgcttaggtcac
ggcatcaaactcggcaccagcacaggacacatctacaaatatgacggcttcagggacaca
gactttgagaagatttctgagtttttcaaggcgaactacaagctggacctgacagagaag
gacatgtgtgtgaagggctggaactggggaacagccaagttctctggtccgctgctatcg
ttcgatgtcaatgacagcacagcgttcgagatcccgctgtccaacgtgtcacagtgcgcc
acagggaagaacgaagtcactctggagtttcaccagaatgacgacacagaggtctccctc
atggaggtccgattctacgttccacctagccaggccgatgaacgacaagaccctgtggag
gcatttgcccagaatgtgttgtctaaggcggatgtgatccaggctactggagacgctgtg
tgtatcttcaaagagctgcagtgtcttacacctagaggaagatatgacattcgtatctac
ccgacgttccttcacctgcatggtaagacttttgactacaagattccctacaccaccgtc
ctccgtctcttcctgctgccacacaaggatcagaggcagatgttctttgtgatcagtctg
gatcctcccatcaagcagggtcagacacgttatcactttctcattctgctcttctccaaa
gaagaggatatcaacctcactcttaacatgagcgaagaggatgtggagcgtcgttttgag
ggtaaactaagtaagaatatgtctggatctctctatgagatggtcagcagggtgatgaag
gccctggtcaaccgcaagatcactgtacctggaaactttcaaggccactccggggctcag
tgcatcacttgctcctacaaggcatcttcaggcctcctctatcccctggaaagaggcttc
atctacgtccacaagcctcctgttcacctgcgctttgaggagatttcctgtgtcaacttc
gccagaggcaccaccacgacacgttcctttgactttgagattgaaaccaagcagggaaat
cagtacactttcagcagcattgagagagaggagtatggcaaactgtttgactttgttaat
gccaagaagctcaacatcaagaacagagggttcaaagagggcatgaagggtaagattgac
gagtacagcgactcagacgatgaccagcatgacgcctacctggagaggatgaaggctgag
ggcaagatcagagaggagggcaacgacagcgatgattcggatggcggaagtgatgagtca
tttaaccctggagaggaagatgatgacattgcagaggagtacgacagcaatgcttcagca
agcgacagcagtgatgaaggtgacgaaagcgaagatgagagtgcgaagaagaaaaaagtc
aaaaaagccaaagtggtgaaggagaaaaaagaaaggaagccacggaaagagaagaagcag
aaggatagcggtggccccaagaggccgatgagtgcctacatgctttggctcaactccagc
cgcgagcgaatcaagtcagaaaaccccggcatctctatcacagagatctctaagaaggcc
ggagagatgtggagacaactgggcaaagacgagaaggaggagtgggaaacaaaagcaggc
gaggcgaagcggcagtacgacaaagcaaagaaagagtacaaagagagcggcggaggatca
acttccagttccaagaaagagagtaaaaaatctggaggcaaaaaggacgagaagaagagg
aagtctgccggaggagacaaggacagggaacgaggaggaggcaacgacagcttcaagagc
aaagaattcatcgagaccagcgaggagagctcatcagattctgaccacaagagcaagtcc
aagaggaagaaggaatcagaagaagaggaggaggaagcagtgtccacacctgccagctca
gaggaagaatccgactaa
DBGET
integrated database retrieval system
