Amphiprion ocellaris (clown anemonefish): 111576535
Help
Entry
111576535 CDS
T06018
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04110
Cell cycle
aoce04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111576535 (smc1a)
04114 Oocyte meiosis
111576535 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoce03036
]
111576535 (smc1a)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111576535 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
111576535 (smc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
111576535
NCBI-ProteinID:
XP_023138025
Ensembl:
ENSAOCG00000009905
LinkDB
All DBs
Position
8:complement(31352961..31366260)
Genome browser
AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDDGSERSFTRVIIGSSSEYRINHKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASIQLQLFKLYHNETEIEKLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMDELDKEMRAVELAKQDFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYISTSKQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
ESSSQRTSSSVLAKEALIEIDYSNLSEDLKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFHTCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaaactgatagagatcgagaacttcaagtcgtataagggaagacagatc
attggaccgtttcataagttcactgcaatcatcggacctaatggatcaggaaagtccaac
cttatggatgccatcagctttgtgttggcagagaagaccagtaacttgcgtgtaaagact
ctgaaggatctaatccatggagcgcccgtgggaaaaccagcagccaacagagcctttgtc
agtatggtgtaccaggaagatgacggatcagaacgctccttcacaagggtcattattggt
tcctcctctgagtaccgcatcaaccataaagtggtgggtctgcctgaatacagtgaagag
ctggaaaaacttggcattctgatcaaggctaggaatttcctggtcttccagggagctgtt
gagtccattgccatgaagaaccccaaagaacgtacggcgttgtttgaggagatctcacgt
tctggagaactggcccaggaatatgaccggaggaagaaggagatggtgaaagcagaggag
gacacacagttcaattatcatcgtaagaaaaacattgctgcagagcgcaaagaagccaag
caagagaaagaagaggctgaacgttaccaacgtcttaaagacgaagtagccagggccagt
atacagttgcagctcttcaaactctaccacaatgaaactgagattgagaagctgaacaaa
gagctcggtcagagaaacaaggagattgacaaagaccgtaagaagatggaccatgtggag
gaggagcttaaggacaagaagaaggagctgggcagactgatgagggagcagcagaccatt
gagaaagaaatcaaagagaaggactctgagttgaatcaaaagaggcctcagtacatcaag
gccaaagagaacacctcgcacaaaatcaagaagcttgaggcggcgcgaaaatcactgcaa
aatgcccagaagatgtacaagaagcggaaagcagacatggacgagctggataaagagatg
agggcagtggagctggccaagcaagattttgaggagagaatggaggaagaggcgcagagc
cagggccaggatctcaccctagaggaaaatcaggttaagcagtaccatcgtctgaaggaa
gaggctagtaagcgtgctgccactctggcacaggagctggagaagttcaaccgtgaccag
aaggccgaccaggaccgccttgacttagaggagaggaagaaagtggagacagaggccaaa
atcaaacagaagatccgtgaaattgaggaaaaccagaaacgtatcgagaagctagaggat
tatatttccaccagcaagcaatcgctagatgagcagaagcgcatggaggaagagctgact
gaggaggttgagatggccaagaggaggatcgatgagatcaacatggagcttaaccaggta
atggagcagctgggagatgccagaatcgacaggcaggaaaacagtcgccagcagcgcaag
gcagagatcatggagagtatcaaaagactgtatcctggctctgtgtacggtcgtctaatc
gacctgtgtcagcccactcagaagaagtatcagattgctgtgaccaaagtgttgggcaag
aacatggatgccatcatcgttgactcagagaagactggcagagactgtattcagtacatc
aaggagcagagaggagagcctgagaccttccttcctctcgactacctcgaagtgaaacca
acggatgagaaactgagggaactgcgaggagccaagctggtgattgatgtgattcgctat
gagccaccccacatcaagaaagcccttcagtacgcttgtggcaacgctctggtctgtgag
aatgtagaagatgcacgaaggattgcctttggagggccgtacagacacaagacggtagcc
ctggacggtactttgttccagaagtctggagtcatctctggaggagccagcgatctcaag
gccaaggccaggcgttgggacgagaaggcagtggacaagctgaaggagaagaaggagaag
ctcactgaagagctcaaggagcaaatgaaagctaagaggaaggaggccgagctgcgtcaa
gtgcagtctcaagctcacggtctgcagatgagactcaagtactcccagagtgatctggaa
cagacaaaaacccgccacctttccctcaacatgcaggagaagtccaagctagagagtgag
cttgcaaactttggccctcgcatcaatgacatcaagaggattatccaatcccgtgagcga
gaaatcactgacctgcgtgaccgcatgaacctggtggaggatgaggtgtttgttgaattc
tgtaaagagattggagtcaggaacatcagagaatttgaggaggagaaggtgaagaggcag
aatgagatcgcaaagaagcgtctcgagtttgagacccagaagacccgtctgggtattcag
gtggactatgagaagaaccagctgaaggaggatcaggagaaggtcatgatgtgggagcag
actgtaaaaaaggacgaggctgaaatagagcgactgaagaaggaagagcaccgacacatg
aagatcattgatgagacaatggctcagctgcaagacctaaagaaccagcacctcaccaag
aaatctgaagtcaatgataaaaatcatgagatggaggaaatccgcaaaaaactgggtggc
gccaacaaggagttgacccagctacagaaggaggtgactgctattgagaccaaactggag
cagaagcgcagcgaccgtcacaacttgctgcaagcctgtaagatgcaggacatcaggttg
cccctacgttctggaacaatggatgacatcagccagggagaggggagctcccagacggac
gagtccagcagccagaggacttccagcagcgttctggctaaagaggctctcatagagatt
gactacagcaacctgtctgaagaccttaaggatgcactgtcggaggaagagatcaaggca
gagacgaacacactgcagcagcgtctgaatgagcagcagagcatcctgcagaggatcagc
gcgcccaacatgaaggccatggagaagctcgagagcgtcagggacaagttccaagagacc
agcgacgagtttgaggctgctcgcaagagagccaagaaagccaagcaagcctttgagcag
atcaagaaggaaaggtttgatcgttttcatacctgctttgagtctgtggccaccaacatt
gatgagatctacaaggccttgtcgcgcaacagcagtgctcaggcttttctggggccagaa
aacccagaggagccgtatctggatggtatcaactataactgtgtggctccaggaaagagg
ttcagaccaatggacaacttgtctggaggagagaagactgttgctgctttggctctgctc
tttgctattcacagctacaaacctgcccccttctttgtcctggatgagattgacgcagct
ctggacaacactaacattggcaaggtggccaactacatcaaagaccaatcagtgcagaac
ttccaggccatcgtcatttctctgaaggaggaattctacaccaaggcagactcacttata
ggtgtttacccagagcaaggagattgtgttatcagcaaagtgctcaccttcgacctctcg
cagtatcccgatgccaacccgaatcccaatgaataa
DBGET
integrated database retrieval system
