Amphiprion ocellaris (clown anemonefish): 111576587
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Entry
111576587 CDS
T06018
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111576587 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111576587 (sf3b3)
03041 Spliceosome [BR:
aoce03041
]
111576587 (sf3b3)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111576587 (sf3b3)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111576587 (sf3b3)
Spliceosome [BR:
aoce03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111576587 (sf3b3)
Complex B
111576587 (sf3b3)
Complex C
U2 SnRNP specific factors
111576587 (sf3b3)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
111576587 (sf3b3)
TFTC complex
111576587 (sf3b3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
111576587
NCBI-ProteinID:
XP_023138094
Ensembl:
ENSAOCG00000007158
UniProt:
A0A3Q1AQY3
LinkDB
All DBs
Position
3:complement(33587363..33627168)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGISHAIHGNFSGTKMQEIVVSRGKILEILRPDANTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVAAAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDEFGDKGTM
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHQETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGSPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFTNTG
DDWYVLVGVARDMILNPRSVGGGFIYTYRLVSGGEKLEFVHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVSGIYTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacatcaccctgcagcgcgccactggcatctctcatgccatccatgga
aacttctcaggaacaaagatgcaggagattgttgtttccagagggaagatcctggaaata
ttgcgaccagatgccaacacaggaaaggtgcacactctcctcacagtggaagtgtttggc
atcataagatccctgatggccttcagactcactggaggaaccaaagattacattgtcgtg
ggaagtgacagcggccgtatcgtcatcctggagtatcatccatcaaaaaacatgtttgag
aagatccaccaggaaacgtttgggaagagcggctgccgacgcatcgtccctggacagttc
ctggctgtcgacccaaaaggcagagctgttatgataggagcgatagagaaacagaagctg
gtctatattctgaacagagatgccgctgccagactgaccatctcctctccattggaagcc
cataaagcaaacacgcttgtctaccatgtagtgggagtcgacgtcggctttgaaaatcca
atgttcgcttgcttagaaatggactacgaggaagccgacaatgacccaacaggagaagct
gctgcaaacacacaacagacgctcaccttttacgagctggatctcggcttgaatcacgtg
gtccgcaagtacagcgaggctttggaggaacatggaaatttcctcatcaccgttcctggt
ggttcagatggtcccagtggagttctgatctgctctgaaaactacatcacttataagaat
tttggagaccagcctgacattcgctgtcccatcccacgacgcaggaatgacctggatgac
ccagagcgtggcatgatatttgtctgctcagccacccacaagaccaagtccatgttcttc
ttcctggcccagactgagcagggagacatctttaaagttacgctggaaacagatgaagaa
atggtcacagaaatcaggctgaagtacttcgacacgattcctgtggcagcagccatgtgt
gtcctgaagactggcttcctgtttgtttcgtcagagtttggaaaccattacctttaccaa
attgctcatttgggtgatgatgacgacgagccggagttttcctctgcgatgccgctggaa
gagggagacaccttcttcttccagcctcgtccactgaaaaacctggtgctggtggacgaa
caggagaacctgtcacctatcatgtcctgtcagattgctgatttggccaatgaagacaca
cctcagctgtacgtagcctgtggacgagggccgaggtcaactctaagagtccttcggcac
ggactggaggtttcagagatggctgtgtctgaactgcccggtaatcccaacgctgtgtgg
acagtacgcagacatgtagaagatgaatttgatgcctacatcatcgtgtctttcgtcaac
gctactctggttctgtccattggagagactgtagaagaagtgacagattctgggtttctg
ggaacgacaccaactctgtcctgctcactgctgggtgaggatgccctcgtgcaggtttac
ccagatggtatccgtcacatccgagcagacaagcgtgtgaacgagtggaagactcctggt
aaaaaaactatcgtccgctgtgctgtgaaccagcgacaagtagtaatcgccctcactgga
ggggagctggtctactttgagatggacccgtctggccagctgaatgagtacacagagagg
aaggagatgtctgcagatgtggtttgcatgagtttggccaacgttccacctggtgagcag
cgttctcgtttcctggctgttgggctggttgacaatactgtccgaatcatctccctggac
ccgtcggactgtctgcagccgttgagtatgcaggctttaccggcccagccagagagtctg
tgtatcgtagagatgggaggagtcgagaaacaagatgaatttggagataaaggaaccatg
ggcttcctctacctcaacataggacttcagaacggtgtgctgctgaggacagttttggac
ccagtgaccggtgacctgtcggataccagaacacgatacctgggatcacgaccggtcaaa
ctgttcagagtcaggatgcagggacaagaagctgtgctggcaatgtccagtcgctcctgg
ctcagctactcataccagtctcgcttccatctgacccccctctcatatgagactctggaa
tacgcctccggcttcgcctctgagcaatgccccgaaggcatcgtggccatctccaccaac
acactgagaatcttggctttagagaaactcggagccgtcttcaaccaagtggccttccct
ctgcagtatactcccaggaagtttgtaatccaccaggagaccaacaacctcatcttgatc
gagaccgaccacaacgcctacaccgaggcgaccaaagctcagagaaagcaacagatggct
gaggagatggtggaggctgctggcgaggatgaaagagaactggctgctgagatggccgct
gctttcctcaatgagaatctcccggaagccatttttggatcgcctaaagccggagccgga
cagtgggcctcactggtgcgactggtcaaccccatacagggttcaacactagaccaggtg
cagctggaacagaacgaagctgcctttagtgtggcagtgtgccgttttaccaacacagga
gacgactggtatgttctggtcggtgttgccagagacatgattctaaacccaaggtcagtc
ggcggcggcttcatctacacctaccggctcgtcagtggaggggagaagctggagtttgtg
cacaagaccccagtagaggatgtgcctttggccattgcaccgttccagggacgagtcctg
gtcggagttggaaaactgctgagaatctatgacttgggcaaaaagaagctgctacgcaag
tgtgagaacaagcatgttcccaacctggtgtctggcatctacaccattggccagcgtgtg
atcgtgtctgacgtccaggagagtctgttctgggttcgataccgacgtaacgagaaccag
ctcatcatcttcgccgatgacacgtatccccgctgggtgacgacagcctgtctgctcgac
tacgacaccatggcctctgctgacaagtttggaaacatcagcatcgtgcgtcttcctccg
aacaccagtgatgatgtggatgaggaccccacagggaacaaagctttatgggaccgaggc
ctgcttaatggagcatcacagaaggctgaggtaatcgtgaactaccacgtaggagagacc
gtgttatcgctccagaaaaccactctgatccctggaggctctgagtctctggtctacacc
acgctgtctggaggcatcggcattctggtcccgttcacttcacatgaggatcatgacttc
ttccagcatttagagatgcacatgcgctccgagtttcctccactctgtggccgagaccac
ctcagctttagatcctactacttcccagtcaagaatgtgattgatggagatctgtgcgag
cagttcaacagcatggatcctcacaagcagaaaagcgttgcagaggagctggacagaacg
ccacccgaagtctccaagaaactggaggacattcgcactcgctacgctttctaa
DBGET
integrated database retrieval system
