Amphiprion ocellaris (clown anemonefish): 111576624
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Entry
111576624 CDS
T06018
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03022
Basal transcription factors
aoce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111576624 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
111576624 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111576624 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111576624 (gtf2h3)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111576624 (gtf2h3)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111576624 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
111576624
NCBI-ProteinID:
XP_023138144
Ensembl:
ENSAOCG00000004883
LinkDB
All DBs
Position
6:complement(25981222..25986024)
Genome browser
AA seq
300 aa
AA seq
DB search
MASEDEISLLVIVVDVNPIWWGQQAQREQEFTLSKCLDAVMVMGNSHMAMSRTNKLAVIA
SHCQDSHFLYPSKSWKAGDDGADDASSSGDGKYELLSVANNLIAEEIRNVMSKTEVRGNS
TDTLLAGTLAKALCYVNRVSKDLEVGQEIKSRILVIKAAEDCALQYMNFMNVIFAAQKQN
ILIDACVLDSNSGLLQQACDITGGLYLKIPQQVALAQYLLWVFLPDSEQRSQLVLPPPAH
VDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKPKKKKLKQTT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaggatgaaatcagcctgctggtcatcgtcgtggatgtaaacccgatatgg
tgggggcaacaggctcaacgcgaacaggagttcactttgtccaagtgtctggatgcagtc
atggtgatgggaaactcacacatggccatgagcagaaccaacaagctggctgtcatcgca
agtcactgtcaagacagtcacttcttgtatcccagtaagagctggaaagctggcgacgat
ggtgccgatgatgcatcctccagcggggatggaaaatacgaactcctgtctgtcgccaac
aaccttattgcagaagaaatcaggaatgtcatgtcaaaaactgaagtgaggggaaattca
actgatactctgttagctggaactctggccaaagctctctgctatgttaacagggtctca
aaagatctggaagtgggacaggagattaaatcaagaatattagtgataaaagcagctgag
gactgcgccctccagtacatgaacttcatgaatgtcatttttgcagcccaaaagcagaac
atcctgattgatgcctgtgtgttggactcaaactctggtctccttcagcaggcttgtgat
atcactggaggattgtacctgaagataccacagcaagttgccctggcgcagtatcttttg
tgggttttcctgcccgactcggagcaacgttcacagctggtgctgccgccgcctgcacac
gtggactacagagctgcctgtttctgtcaccgtaacctcattgaaatcggttatgtgtgc
tcagtttgtctttcaatattctgcaacttcagccctatttgtacaacatgcgagactgcc
ttcaaaatccaactaccacagatggtgaagcctaaaaagaagaaactcaaacaaaccacg
tga
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