Amphiprion ocellaris (clown anemonefish): 111576662
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Entry
111576662 CDS
T06018
Symbol
ptch1
Name
(RefSeq) protein patched homolog 1 isoform X1
KO
K06225
patched 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111576662 (ptch1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
111576662
NCBI-ProteinID:
XP_023138219
Ensembl:
ENSAOCG00000004411
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All DBs
Position
6:complement(29273747..29327787)
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AA seq
1570 aa
AA seq
DB search
MASAANAPSEQENRDPDRPRITRRNRGDYTRSTPLDLEYLQRPSYCDAGFALEQITEGKA
TGRKAPLWLRAKFQRLLFRLGCYIQKNCGKFLVVGLMIFGAFAVGLRAANLETDVEKLWV
EVGGRVNQELKYTRQKIGEEAMFNPQLMIQTPREEGANVLTVEALLQHLESAIRASRVHV
YLYNRQWKLEHLCYKSGELVTETHFMDQIIEKLHPCLIITPLDCFWEGAKLQSGMVYLPG
KDPLQWTNFDPKDFLEDLRRANFPVEGFEDMLEKADVGHGYMDRPCLNPADPDCPLTAPN
KNSTKPFDVARALSGGCHGLSRKYMHWQEELIVGGTTKNGSGPLLSAQALQTMFQLMTPK
QMFEHFRGYEEVSHINWNEEKAAAILEAWQRRYSEAVLQSVAANSSQKVLSFTTTTLEDI
LKSFSDVSVIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVTLSVAAGLGLCSL
LGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVAL
TSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRFDI
FCCFYSPCANRVIQIEPQAYLDGADGSRYSPPPSYRTPPPSYRTPPPSYSSPPPSYSSHG
FAQQTQITMQSTVQLRTEYDPRTQAFYTTAEPRSQISVQPINPPPTRNNPNNDYYNNNNN
TNNSSSSNHANLSSNNNSGSRSNGGSRGSATFSHHHPAPPPAAPTSSASSVPLGDTASST
CQSPENNSSTRDLLSQIGEASLGLRCLEPPCSRWTLASFAEKHYAPFLLQPTTKVVVIVL
FLCLLGVSLYGTTQVRDGLELTDIVPRETSEYDFIGAQFKFFSFYNMYVVTQRADYAQNQ
PLLHQLHQRFHTVRYVLKEDNGQLPRMWLHYFRDWLQGLQQAFDKDWEAGRITPISYRNG
SDDGVLAYKLLVQTGRREKPINFNQLTRQRLVDADGIINPGAFYIYLTAWVSNDPVAYAA
SQANIRPHPPEWLHDRTDSMPETRLSIPAAEPIEYAQFPFYLNGLRETPQFVEAIESVRA
ICSNYSRQGLPSYPNGYPFLFWEQYVSLRHWLLLSISVVLACTFLVCALFLLNPWTAGII
VLVLSLMTVELFGFMGLMGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDRHKRAV
LALEHMFAPVLDGAFSTLLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLS
YFGPYPEVSPVDGRSRLPTPSPEAPPPVVHFSVRPHYTTAATNTSGAASDSSDSEYSSNT
TVSGISQELQNYNLHSHRGHTRAEEQQQQYHLQTSRGRAARTEEERRAGSGHRRSARQPD
PPAYTVSSSVSSQGCDSGPQQGATQRNNSRDPKSQLHWQAPPPARPRTDAFETATEAGGH
YSSHGHREHSAGHRGRSSHNPQPNQHLPHHHPNPTPYCQPITTVTASASVTVAVHPPPPL
SGQSPASSYPGYTAADSYCPSGQEEPESAFQDPHVPLYTHTGARGVKVEAMELQDLEFEA
AESNSGRRAS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctgctaatgcgccctccgagcaggaaaacagagaccccgatcggccgagg
ataacgcggaggaacaggggggactatacccgcagcacaccgctggatttggagtatttg
cagcggccgagctactgcgatgcgggctttgctttggagcaaatcacagaggggaaggcg
actgggaggaaagcacctctgtggctgagagcgaagttccagagacttttatttaggctg
ggctgttacatacaaaagaactgcggaaagtttttggttgtgggcctcatgatttttgga
gcttttgctgtgggcttaagggcagctaatttggaaacggacgtggagaaactctgggtg
gaagttggtgggcgcgtgaaccaggaactaaagtacacgcggcagaagataggcgaggag
gccatgtttaaccctcagctgatgatccagacaccgcgggaggagggagccaatgttcta
acagtggaggcgcttctgcagcacctggagtcagctatccgagccagcagagttcatgtt
tacctttataacagacaatggaaattagaacacttatgctacaaatcaggagaactagtc
acggaaactcattttatggatcagatcatagaaaagttacatccctgcctcatcatcacc
cctttggactgtttctgggagggagctaaactccagtctggaatggtctatctcccaggt
aaagaccctctacaatggaccaactttgaccccaaggacttccttgaggacttacgaagg
gcaaacttccccgtggaaggctttgaggacatgttggagaaggcagacgttgggcacggc
tacatggatagaccctgtctgaaccctgctgaccctgactgccccctcactgcacccaat
aagaactccaccaagcccttcgatgtggcacgggccctgagcggtggctgccatggacta
tccaggaaatacatgcactggcaggaggaactgattgtcggagggaccaccaagaacggc
agcggacccctgctcagtgcccaggccttacagaccatgttccagctgatgactcccaag
cagatgtttgagcactttcgaggctacgaggaggtttcccacatcaactggaatgaagaa
aaggctgcagccatactggaagcctggcagaggagatactctgaggcagtgctgcagagt
gtcgcagcaaactcgtcccagaaggttttgtctttcaccaccaccactctggaagatatt
ctcaagtctttctctgacgtcagcgtcatccgtgtggccagtggatacctgctgatgctg
gcctatgcgtgtctgaccatgctgcggtgggactgtgccaagtctcagggggctgtcggc
ctggcgggtgtcctgctggtgacgctatctgtggcagctggtctgggcctctgctctctt
ctgggcatctccttcaacgctgccaccacacaggtgctcccgttcttggctctgggagtc
ggagtggatgatgtcttcctcctcgctcatgccttcagtgagaccggacagaacaagaga
atcccgttcgaggaccgtacgggggagtgtctgaagaggacaggggccagcgtggctctc
acctccatcagtaacgtcacagcattcttcatggcagccctcatccccatcccagcgctc
agagccttttctctacaggctgcagtggtggtggtgtttaacttcgccatggtgctgctc
atctttcctgccatcctcagcatggatctctaccgacgagaagacagacgttttgacatt
ttctgctgcttctacagcccatgtgccaatcgtgtgattcagattgagcctcaggcgtac
ctggatggggcagatgggagtcgctacagccctcccccatcatatcgcactcctcctccc
tcgtatcgcacgcctcccccaagctacagcagcccccctccttcctacagcagccacggc
tttgcccagcagacccagatcaccatgcagtccacggtgcagctcaggacagagtacgac
ccccggactcaggccttctacaccacggccgagcccagatcccagatctctgtgcagccc
atcaacccacctccaactaggaacaaccccaacaatgactattacaataacaacaacaac
accaacaacagcagcagcagcaatcatgcaaacctcagcagcaacaacaacagcggaagc
cgaagtaacggtggatctcgaggttctgccaccttctcccatcatcaccctgctcctccc
ccggctgccccgacatcaagcgccagctcagttcctctgggtgatacagcctcatcaact
tgccagagtccagagaacaacagctccacgcgggacctgctgtcccagattggagaggcc
tcactgggcctgcgctgcctcgagcccccctgttcccgctggaccctggcctcttttgcc
gagaagcattatgctccgttccttctgcagcccaccaccaaggtggttgtgattgtgctg
ttcctctgcctgctgggagtcagtctatatgggaccacccaggtgagggatggcctagag
ctgacggacatcgtacccagagagaccagcgagtacgacttcattggtgcccagttcaag
ttcttctccttctacaacatgtatgtggtgacacagcgggctgattatgcccagaaccag
ccgctgctgcaccagctccaccagaggttccacactgttcgctatgtgctgaaggaagac
aatggacagctgccacgcatgtggcttcactacttcagggactggctgcaaggtctccag
caggcatttgacaaggactgggaggccggccgcatcacccccatcagctacaggaatggc
tcagatgatggcgtcctggcgtacaaacttctggtacagacaggacgcagggaaaagccc
atcaacttcaaccagctgactcgtcagaggcttgtggatgctgatgggatcatcaaccct
ggagctttttacatctacctaaccgcctgggtcagcaacgatcctgtggcatacgccgcc
tcgcaggctaacattcgcccacaccctcccgagtggctccacgaccgtaccgactccatg
cccgagacacgcctcagcattccggctgctgagcccatcgaatacgcacagttccccttc
tacctcaacgggctccgcgagacgccacagtttgtggaggccatcgaaagcgtgcgggcc
atctgcagcaactatagccgacaaggcctgccctcctaccctaatggctaccctttcctg
ttctgggaacagtacgttagtctacgccactggcttctgctgtccatcagtgttgtgctt
gcctgcacctttctggtctgtgcccttttcctgctcaacccgtggactgctggcattata
gtgttggtgctttctctcatgaccgtggagctgtttggcttcatggggctgatgggaatc
aagctgagtgccgtccctgttgtcattctcatcgcctctgtgggtatcggagtggagttc
accgtccatgtggctctggcattcctgacagccataggggatcgacacaagcgggcagta
ctggcattggagcacatgtttgctccggtgctcgatggagccttttccactttattaggt
gtcctaatgcttgcaggctctgagttcgacttcatcgtcaggtatttctttgcagtgtta
gccatcctaacaatcctcggagtgctgaatggattggtccttcttccagtattactgtca
tactttggaccctatccagaggtatcaccagttgacggtcgtagccgattacccaccccc
tctccagaggcccctcctcccgtggtccatttctcggtccgtcctcactacaccactgct
gccaccaacacctctggtgcagcttcagactcgtcagactcagagtacagctccaacacc
acagtgtccggcatcagccaggagctgcagaactacaacctgcactcacacagaggacac
actcgagcggaggagcagcagcagcagtatcacctccaaaccagcaggggcagagcagcc
aggacagaggaggaaaggagggcaggatcggggcatcggcgctcagccagacagcctgat
cctccggcctatacagtgtcctcgtctgtctcctctcagggttgtgattctgggccccaa
caaggggcgactcagcgaaacaacagcagggaccccaagagccagctgcactggcaggcc
ccacccccagcccgaccgcgcacggacgcttttgaaactgctactgaggctgggggccat
tatagctcacacggccatagagaacactcagcaggccacagaggccgctcttcccacaac
ccacagcctaaccagcacctcccacaccaccaccccaaccccaccccgtactgccaacct
atcaccacagtaacagcgtcggcctctgtcaccgtcgccgttcacccgcccccgcccttg
tccggccagagccctgcttcctcttacccaggatacactgcagcggacagttactgccca
tcagggcaagaggagccagagtctgcctttcaggacccacatgtgccactctacacccac
acaggggccagaggagtcaaggtggaggccatggagctgcaagatttggaatttgaggca
gctgagagcaacagtggcagacgggctagctga
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