Amphiprion ocellaris (clown anemonefish): 111576718
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Entry
111576718 CDS
T06018
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04150
mTOR signaling pathway
aoce04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111576718 (lrp6)
04150 mTOR signaling pathway
111576718 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111576718 (lrp6)
Membrane trafficking [BR:
aoce04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
111576718 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
EGF
Motif
Other DBs
NCBI-GeneID:
111576718
NCBI-ProteinID:
XP_054862439
Ensembl:
ENSAOCG00000022147
LinkDB
All DBs
Position
21:complement(160788..210689)
Genome browser
AA seq
1613 aa
AA seq
DB search
MGVALRSLLWCTFCFLVRGEPLLLYANRRDLRIVDAAHEKSNATVVVGGLEDAAAVDYVF
SQGLIYWSDVSEEAIKRTFFNQSGGSAMQTVVPGLASPDGLACDWLGRKLYWTDSETNRI
EVSELDGSLRKVLFWQELDQPRAIALDPERGFMYWTDWGEIPKIERAGMDGTNRSMIIDK
EIYWPNGLTLDYGQQKLYWADAKHNFIHRCNLDGTSREVVVKGELPHPFALTLYEDTLFW
TDWNTHSIHSCRKQTGAEQRVVHSDIFSPMDIHVFSPKRQPDSVSSSCSLNNGGCSHLCL
LSPVKPFHQCACPTGVQLLEDGQTCRDGATQMLLLARRTDLRQISLDTPDFTDIILQVDD
IRHAIAIDYDPVEGYIYWTDDDVKAIRRSLLDGSDAQFVVTLQVNHPDGIAVDWIARNLY
WTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADLDG
MERVVMVNTSLGWPNGLALDYDQRKIYWGDAKTDKIEVMNMDGSGRRVLVEDKLPHIFGF
TLLGDYIYWTDWQRRSIERVHKRSAEREFIIDQLPDLMGLKATYVHKTFGTNPCAENNGG
CSHLCLYKPQGIQCGCPIGLELIADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAIPL
TGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKN
LYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAAM
DGTGRITLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGQDREVIADDLPHPFGL
TQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACASTNG
HCSHLCLAVPVSSFVCGCPAHFSLNYDNKTCSAPTSFLLFSQKMAINRMVIDEQQSPDII
LPIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSMTVVSSSLSGPNQGLQLYD
LSIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNLLE
RSPKIERAALDGTEREVLFFSGLGKPVALAIDSEVGKLFWVDSDLRRIESSDLSGANRIV
IADSNILQPVGLTVFGNHLYWIDKQQQMIERIDKATREGRTKIQARIAYLSDIHAVHELD
MREYGKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLPDELSCGEPPTCSPEQFSCTS
GEVDCIPQAWRCDGYPECDDSSDEEDCPVCSESEFQCDSRQCIDLSLRCNGEINCQDRSD
ENKCEVRCPADQFTCSNGQCIGKHKKCDHNMDCTDNSDEIGCYPTEEPPPPPNNTISSIV
GVVMALFVVGAIYFVCQRVLCPQMKDDGETVTNDFVVHGPSSVPLGYVPHPSSLSSSLPG
MSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRSQY
TMEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRQVPLKAKGYASDL
NYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgcgctgcggagcctgttgtggtgtactttttgtttcctcgttcgaggagaa
cctctgctgctgtacgcgaaccggcgggacctccggattgtggacgctgcacacgagaag
tctaatgccacggtggtggtgggcgggctggaggacgccgctgccgtggactatgtcttc
tcccagggcctcatctactggagcgacgtgagcgaggaggccatcaaacggaccttcttc
aaccagtcggggggcagcgccatgcagaccgtggtgccgggcctggcctccccggacgga
ctggcctgtgactggttaggcaggaagctgtactggaccgactcggagaccaaccggatc
gaggtgtccgagctggacgggtccctgaggaaggttctgttctggcaggagctagaccag
cccagagccatcgccctggacccagagagagggttcatgtactggaccgactggggtgag
atcccaaagattgagcgggccgggatggatgggaccaaccgctccatgatcatcgataag
gagatctactggcccaacggactgacgctggactatggccagcagaagctctactgggcc
gatgccaaacacaacttcatccaccgctgcaacctggacgggacctccagggaggtggtg
gtgaaaggggagctgcctcacccctttgccctcaccctgtacgaggacacgctgttctgg
accgactggaacacccactccatccactcctgcaggaagcagaccggtgccgagcagcgg
gtcgtccactcggacatcttctcccccatggacatccacgtgttcagccccaagaggcag
cccgactcagtgagcagctcctgttccctgaataatggcggatgttcccacctctgcctg
ctgtctccggtgaagcccttccaccagtgtgcctgtcccaccggagtccagctgctggag
gatggacagacctgcagagacggtgcgacccagatgctgcttctcgcccggcgaactgac
ctgcggcaaatctctctggacacacccgacttcactgacatcatcctgcaggtggacgac
atccggcacgccatcgccatcgactacgacccggtggagggctacatctactggacggac
gacgacgtgaaggccatccgccgctcgctgctggacggcagcgacgcccagttcgtggtc
acattgcaggtcaaccatcccgacggcatcgccgtggactggatcgccaggaacctgtac
tggactgacactggcactgaccgcattgaggtgacccggctcaacgggaccatgaggaag
atcctaatctctgaggacctggacgagcccagggccatcgtactggaccctgtggccggg
tacatgtactggaccgactggggcgaggttccgaagatcgagcgggcggacctggacggg
atggagcgggtggtgatggtcaacacatctctggggtggcccaacggactggccctggac
tacgaccaacgcaagatctactggggggatgccaagacggacaagatcgaggtgatgaac
atggatgggtcgggtcgacgggttctggtggaggacaaacttcctcacatcttcggcttc
acgctgctgggcgactacatctactggaccgactggcagcgccgcagcatcgaacgcgtc
cacaaacgcagcgctgagcgcgagttcatcatcgaccagctgcctgacctcatgggcctg
aaggccacctacgtccacaagaccttcggtaccaacccctgtgcggagaacaacggcggc
tgcagccacctctgcctctacaagcctcagggcatccagtgtggctgccccattggtctg
gagctcatcgccgacatgagaacctgcatcgtccctgaggctttcctgctgttttcccgc
cacaccgacatccgaaggatctccctggaaaccaacaacaacaacgtggctatcccgctg
actggcgtcaaggaggcgtcagcgcttgactttgatgtcaccgacaaccgaatatactgg
accgacatcacgctgaagaccatcagccgggccttcatgaacggcagcgctctggaacac
gtggtggagttcggtctggactacccagaggggatggcggtggactggttggggaagaac
ctgtactgggctgacaccggcaccaaccgcatcgaggtggccaaactggacgggcagcac
aggcaggttctggtatggaaggacctggacagtcctcgggcgctggctctggatccagct
gaagggtacatgtactggaccgagtggggcgggaagcccaagatcgaccgagcggcgatg
gacggtactggtcgcatcacactggtggctgacgtgggccgagctaacggactgaccatc
gactacgcagagcgacggctgtactggaccgacctggacacgacgctgatcgagtcctcc
aacatgctgggccaggaccgggaggtgatcgccgacgacctgccccacccgttcggactt
acccagtaccaggactacatctactggacagactggagccagcgcagcatcgaacgggcc
aacaagaccagcggtcagaaccggacagtgatccagggccacctggactacgtcatggac
atcctggtgttccattcgtccagacagggtggctggaacgcctgcgcctccaccaacggt
cactgctcacacctctgcctcgccgtccctgtcagcagctttgtctgcggatgccccgcc
cacttctccttaaactacgacaacaagacctgcagtgctccgacgtcgttcctgctgttc
agccagaagatggcgatcaatcggatggtgatcgatgagcagcagagtcctgacatcatc
ctgccgatccacagcctgaggaacgtccgagccatcgactatgacccgctggacaagcag
ctgtactggatcgactccaagcagaacgtgatccgccgggctcaggaggacgggaaccag
agtatgacggtggtgtccagctccctgtctggacccaaccagggtcttcagctctacgat
ctgagcatcgacatctacagccgcttcatctactggaccagcgaggtgaccaacgtgatc
aacgtgaccagaaccgacggcagccgggtcggagtggttctgaggggagaacacgacaaa
cccagagccatcgtggtcaacccggagagagggtacatgtacttcaccaacctgctggag
cggtcgcctaagatcgagcgggcggcgctggacgggacggagcgggaggtactgttcttc
agtggcctggggaaacccgtggccctggccatcgacagcgaggtggggaagctgttctgg
gtggactcggacctgcgacgcatcgagagcagcgacctctccggagccaaccggatcgtg
atcgccgactccaacatcctgcagccggtgggactgacggtgtttgggaaccacctgtac
tggatcgacaagcagcagcagatgatcgaacgcatcgacaaggccaccagggagggccgc
accaagatccaggcccggatcgcctacctgagcgacatccacgccgtccacgagctggac
atgagggagtacggtaaacacccctgtacctgggacaacggaggctgctcacacatctgc
atcgtcaagggagacgggaccacccgctgctcctgtcccgtccacctggtcctgctgccg
gacgagctgtcctgtggagagccgcccacctgttctccagagcagttctcctgtacctcc
ggggaggtggactgcatccctcaggcctggaggtgtgacggttatccagagtgtgatgac
agcagcgatgaggaggattgtcccgtctgctccgagtccgagttccagtgtgacagccgg
cagtgcatcgacctgagcctccgctgcaatggagagatcaactgtcaggaccggtccgat
gagaacaagtgtgaagtccgatgtcctgctgatcagttcacctgctccaacggtcagtgc
atcgggaaacacaagaagtgcgaccacaacatggactgtactgacaactctgacgagatc
ggctgctacccgaccgaggagcctcctccgccccccaacaataccatcagctccatcgtg
ggcgtggtcatggcgctgttcgtggtgggagccatctacttcgtgtgtcagcgcgtcctc
tgtcctcagatgaaggacgacggggagacggtcaccaacgacttcgtggtccacggtccg
tcctcggtgccgctcggctacgtcccgcatcccagctccctgtccagctctctgccaggt
atgtccagagggaagtctgtcattggctctctgagcatcatgggcggcagcagtgggcct
ccgtacgatcgagctcacgtcaccggagcttcgtccagcagctcgtccagcaccaaagga
acctactttcccccgatcctgaatcctcctccgtctccggctacagtccggtctcagtac
accatggagtttggttattcctccaacagtccgtccacccacaggtcctacagctaccgg
ccgtacacgtaccgccactttgccccgcccaccacgccgtgcagcaccgacgtgtgcgac
agcgactacacgccgggccgccaagtgccgctgaaggccaaaggctacgctagcgacctg
aactacgactcggagccgttcccgccaccgcccacgcctcgcagccagtacctgtcggcg
gaggagaactgcgagagctgcccgccgtcgccttacactgagcgcagctactcccaccac
ctgtacccgccgccgccctcgccatgcacggactcctcgtag
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