Amphiprion ocellaris (clown anemonefish): 111576797
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Entry
111576797 CDS
T06018
Symbol
copb2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111576797 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aoce04147
]
111576797 (copb2)
Membrane trafficking [BR:
aoce04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111576797 (copb2)
Exosome [BR:
aoce04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111576797 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
111576797
NCBI-ProteinID:
XP_023138448
Ensembl:
ENSAOCG00000019988
LinkDB
All DBs
Position
10:13143448..13151610
Genome browser
AA seq
938 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLAEKVAASQENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRENLAKV
NQKAAESLADPTEYENLFPGLREAFAAEHYLRESCLGTSRPAKDYPLVTPNEDRNILEEA
QGYEPKGTFIPMVSKQTPDSEESTSVESAPVAAVTPLQPEPAAPTAVEKEEEEEEEVPTF
SQSEKDKTLDELEVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacatcaagcggcggctgacagccaggtcagaccgagtgaagagt
gtggaccttcacccaactgagccatggatgctggccagcctgtacaacggcagtgtctgt
gtttggaaccacgaaacacagactctggtcaagacttttgaagtgtgtgacctccctgtc
agagcttccaagtttgtggcaaggaagaactgggtcatcacaggagcagatgacatgcag
attcgtgtgttcaactacaacaccttggagagagtccacatgtttgaggcccactctgac
tacatccgatgtattgctgttcatccaacccagccgtatattctcaccagcagcgatgat
atgttgatcaagttatgggactgggacaagaagtggtcgtgcagccaggtgtttgagggt
cacactcattacgttatgcagattgtcatcaaccccaaggataacaatcagtttgccagt
gcctccctggacaggacaattaaggtttggcagcttggatcttcatctcccaatttcact
ttggagggtcacgagaaaggtgtaaattgcattgactactacagtggaggtgacaagccc
tacctgatatcaggggctgatgaccgccaagtcaagatctgggactaccagaacaaaacc
tgtgttcagactctggagggccatgcacagaacgtgtcgtgtgtcagtttccacccggag
ctgcccatcatcatcactggatcagaggacggtacggtacggatctggcactcaagcaca
taccgcctggagagcacactgaactacggtatggaacgagtgtggtgcgtgtgcggcctc
cggggctccaacaatgtggcactaggatatgatgaaggaagcattattatcaaggtgggc
cgagaggagcccgccatgtctatggacaccaacggcaaaatcatctgggccaaacacagt
gaaatacagcaggccaacctgaaggccatgggtgatgctgaaatcaaggatggagagagg
ctgccgctggctgttaaagacatgggcagctgtgagatttaccctcaaaccatccagcat
aaccccaacggaaggtttgttgtggtgtgtggagacggagagtatatcatctatacagct
atggctttgaggaacaagagcttcggctcagcgcaggagtttgtctgggcacacgactcc
tctgaatatgccatcagagaaagcaacagtattgttaaaatcttcaaaaacttcaaagaa
aagaaatctttcaagcctgactttggagctgaaggaatatacggaggtttcctgcttggt
gtgaggtcggtgaatggtctggcattttatgactgggaaaacacagagctaatccgccgc
attgagatccaacccaagcatatcttctggtcagattccggtgaattggtttgcattgct
acagaggagtccttcttcattctgcgttacctggcagaaaaagtagctgcctcccaagag
aacaatgaaggagtgacagaggatggtattgaagatgcctttgaggtccagggagagatc
caggagattgtgaagactggactctgggttggagactgcttcatctacaccagctctgta
aacagactcaactactatgtaggaggagagattgtcactattgcacacttggacaggacc
atgtacctactgggttacatacccaaagatgatcgtctgtacctgggagacaaggagctc
aacattgtcagctactccctgctggtctccgtcctggagtaccagactgctgtaatgagg
agagactttggaatggctgacaaggtgctacctactattcctaaagagcagaggaccaga
gtggcacattttctggagaaacagggtttcaagcagcaggcgctggcagtatccacagac
ccagagcacaggtttgagttggccttgcagctgggagagttgaagattgcctaccagctg
gctgtggaagcagagtcggagcagaagtggaagcagctagcagagctggctatcagtaag
tgccagtttggcctggcccaagagtgcctgcaccatgcccaggattacggtggcctgctc
ctccttgccaccgcctctggtaacgccaccatggtgggcaagctggcagagggggcagaa
agggacggcaagaacaatgtggccttcatgacctacttcctgcaggggaaactagatcaa
tgtttggagcttctaatcaggacgaacagactacctgaagctgccttcctggcccgcacc
tacctgcccagtcaggtgtcccgtgtggtcaaattgtggagggagaacctggccaaggtc
aaccagaaggcagctgaatccctagcagaccctacagagtatgagaatctgttccctggg
ctgagagaagcctttgcagctgaacattacctgagagagtcctgcttgggcacctccagg
cctgctaaagactacccacttgttacacccaatgaagacaggaatattctcgaggaggcc
cagggatatgagcccaaaggaaccttcattcctatggtctccaagcagacaccagacagt
gaagagtccacctcagtggagtcagctcctgttgctgctgtgacgcctttgcagcctgaa
cctgctgctcctacagctgtggaaaaagaagaagaggaggaagaggaagtccctacattc
tcacagtcagagaaagataagactctggatgagctggaggtggacctggacaacatggag
ctggatgacatcgacaccacagacgttaaccttgatgatgacttcctagatgattga
DBGET
integrated database retrieval system
