Amphiprion ocellaris (clown anemonefish): 111576841
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Entry
111576841 CDS
T06018
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04260
Cardiac muscle contraction
aoce04261
Adrenergic signaling in cardiomyocytes
aoce04814
Motor proteins
aoce04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111576841 (tpm1)
04820 Cytoskeleton in muscle cells
111576841 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
111576841 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
111576841 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aoce04812
]
111576841 (tpm1)
04147 Exosome [BR:
aoce04147
]
111576841 (tpm1)
Cytoskeleton proteins [BR:
aoce04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
111576841 (tpm1)
Exosome [BR:
aoce04147
]
Exosomal proteins
Exosomal proteins of microglial cells
111576841 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
CCDC39
Sec2p
Rod_CreS
TMF_DNA_bd
DUF745
Lebercilin
CENP-F_leu_zip
FKBP15
DUF3450
ATG16
ERM_helical
PUMA_CC
HAUS1
Laminin_I
CC_Bre1
DUF1664
SlyX
DUF16
Fez1
TMP_N
Motif
Other DBs
NCBI-GeneID:
111576841
NCBI-ProteinID:
XP_023138584
Ensembl:
ENSAOCG00000022997
LinkDB
All DBs
Position
3:complement(11642818..11654090)
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAESDKKAAEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagctgagcaggccgagtcagacaagaaagcagctgaggacagaagcaaacagcttgag
gacgatttggtagctctgcagaagaagctgaagggaactgaggatgagttggacaagtac
tctgaggctcttaaagatgcccaggagaaacttgagctggctgagaagaaagccaccgat
gctgagggagatgtcgcttcccttaacagacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtcttgccacagctctgaccaagctggaggaggctgagaaggccgct
gatgagagcgagagaggcatgaaggtcattgagaacagggccatgaaggacgaggagaag
atggagctgcaggagatccagctcaaagaggccaaacacatcgctgaggaggctgaccgc
aaatatgaggaggtcgcccgtaagctggtcatcattgagggtgaccttgagcgtacagag
gagcgcgctgagctgtcagaaggcaaatgctctgagcttgaggaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccaggctgagaagtactcacagaaggaggacaag
tatgaggaggagatcaaggtcctcactgataagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtagccaagcttgagaagaccattgatgacttggaagatgagttg
tatgcccagaaactgaagtacaaggccatcagcgaggagctggaccacgccctcaacgac
atgacttccatataa
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