Amphiprion ocellaris (clown anemonefish): 111576932
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Entry
111576932 CDS
T06018
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
aoce03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111576932 (pnn)
03015 mRNA surveillance pathway
111576932 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111576932 (pnn)
03041 Spliceosome [BR:
aoce03041
]
111576932 (pnn)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111576932 (pnn)
Spliceosome [BR:
aoce03041
]
Complex C
Other components
EJC/TREX
111576932 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
111576932
NCBI-ProteinID:
XP_023138676
Ensembl:
ENSAOCG00000029283
LinkDB
All DBs
Position
20:complement(3630744..3638812)
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AA seq
683 aa
AA seq
DB search
MAVVVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQVRRLGGPMAGLGGGRGRGI
NLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDTRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVSSEKQKRRSEIEQK
LEVQAEAERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTK
TKPHIFYLPGKMCSATQKLLDDSTKKLNAVFEERREAFAEHLSKMESRPRRQPNRDQDGN
TAATGTDRPVEGKPAGQVVKVTGNKGTIEMEEDEEEDEEEEEEREKEGDRKVTERDEGEQ
REGGEKEVLKKVEEEEEEGMELSEEGSEKKEGEELKEKEDKEASPGSEEMEVEQGAEKED
RGKEKEVETDSKQGPTDLQNEKTEDIQSSEPTVSSQEAPNTSHQPQPSCPAGEPAGQPPV
TQESSPVPEPQTVCAVPEQDIAISGFKAQDSTVESQIVEEKSGEEALEKLPDSQEAPVIA
PAKEDENGRRGRKKEKESRKGRSRSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSS
SSNSSSRSRSRESGKRKRRPSDKGRDRKKGEERSHHKRGGSAGGGRDSKGSKERRKRRSE
EGRGRSSRSDREHKDRDRKDKRR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtggtgcggagcttgcaggaccagctcgaaaaggcgaaggaaagcttgaaa
aacgtggacgataatattcgtaaattgaccggacgggatcccaatgagtcaagaccgggt
caggtccgtcggctcggcggccccatggcaggcctgggaggaggtagaggcagaggaatc
aacctgctcaggcgtagtctctcagacatgggaagcggcggccctcctgccaagcagagg
gacatcgaaggagccctgctgaggctggcgggggaccagagggccaggagagacacgcgc
cacgacagcgacgccgaagatgatgacgatgtcaaaaagccggcgttgcagtcgtctgta
gtagctacctccaaagagagaacacgccgagatcttattcaggatcaaaccatggatgag
aagggcaaacagaggaatcggcgcatgtttggcctgctgatggggacactgcagaaattc
aagcaagaatccaacgtctcttcagagaagcaaaagcggcgttcagagattgagcagaaa
ctcgaggttcaggctgaggctgagagaaagaaggtggagaatgaaaaacgagagctgttt
gaagagaggagagccaagcagacagagctgagactactggaacagaaagtggaattagct
caactgcaagaggagtggaccagccacaataatcgcctggtgaaatacattcgcacaaag
acgaaacctcacatcttctacctgcctgggaaaatgtgctccgcaacacagaaactcctc
gatgactccaccaagaaactaaatgctgtgtttgaagagaggcgtgaggcttttgctgaa
cacctcagcaagatggagtcgcgcccccggcgacagccaaaccgcgaccaggacggaaac
acagcggcaacggggacggaccgcccggtggagggtaagccagcaggtcaggtagtcaag
gtgacaggtaataagggtactatagaaatggaggaagatgaagaggaggatgaggaggag
gaagaggagagggaaaaagagggggatagaaaggtgacagagagggatgaaggagagcag
agggagggaggggagaaagaagtgttgaaaaaggtagaggaggaggaggaggaagggatg
gagctgagtgaggaggggagtgagaagaaggaaggagaggagctgaaggagaaggaagac
aaggaggccagtccaggttcagaggagatggaggtggagcagggggcagagaaggaggat
agaggtaaggagaaagaggtagaaacagacagtaagcaggggcccacagacctccagaat
gaaaagactgaagacatccagtcctctgaaccaaccgtaagcagtcaggaagcaccaaac
accagtcatcagccccagcccagctgccctgcaggggaaccagcaggacagccccctgtg
acccaggagtcctctccagtcccagagccccagacagtctgtgctgtgcctgagcaggat
attgccatctctgggtttaaggctcaggactctacagtcgagagccagatagtggaagaa
aaatcaggggaagaagccctggaaaaactgcctgattcccaggaggctcctgtcattgcc
cctgctaaagaggatgagaatggcaggagggggaggaagaaggaaaaggaatcgaggaaa
ggtcgcagtcgcagcaacagctcttcgtcttcctcctccggctcctcctccagtggaagt
tcttcttcttcctccggatccagccgctcctcgtcatcgtcttcatcctcctcatcctcg
tcgtccaacagcagcagccgaagtcgcagccgagagagtggcaagcgcaagaggaggccg
tcggataaaggcagggacaggaagaaaggagaagagaggagtcaccacaagagaggaggg
agcgctggaggagggagggactccaagggatcgaaggagaggaggaagaggaggagtgag
gaagggaggggcaggtcttcccggagtgatagggagcataaagatagagataggaaggac
aagagacgctaa
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