Amphiprion ocellaris (clown anemonefish): 111577080
Help
Entry
111577080 CDS
T06018
Symbol
smg9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111577080 (smg9)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111577080 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
DUF6079_1st
ABC_tran
URGCP_GTPase
AAA_30
AAA_16
NB-ARC
AAA_18
MeaB
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
111577080
NCBI-ProteinID:
XP_023138937
Ensembl:
ENSAOCG00000006624
LinkDB
All DBs
Position
9:complement(9056788..9069154)
Genome browser
AA seq
508 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRGDRDVGPPGQNLSGPSRDREYQPRERRDGSEDPPGPLI
QKTPIILAKPPGERAKPSQNAPVSGAPVLDKPIMLMKARDDAGKPGTPPEAAAQSSGPGP
SKMEREGQRPTQPVYQIQNRGMGASASSSAVDPMVGQSKLLPPEKMKHSIKLVDDQMNWC
DSAMEYLRDQTDMLVVGVIGLQGTGKSTIMSLLSANTSEEDQRSYVFRAQTQEIKERGGN
QSTGIDFFITQERVIFLDTQPMLSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFL
FTVCHVVIVVQDWFTDLNLYRFLQTAEMLKPSTPSASHDSTGSSGSDDGAEYYPHIVFLQ
NKARRDDFCPRNLKNMHMVVDKLMAHSHLKYKGTLSMLDCNIFPGLGQDYLAPEVNMFLL
PAQENDGEDNLTKAGSGTYPLFSLLPGYRGHPSFSTMVSKLRSQILAMPRCQLSHTILTE
KNWFHYAARIWDGVKKSSALSEYSRLLC
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccggccacagtcagcctggtatgtacggccagggacgcaggaggaggcga
cgccggggagacagagatgttggacctccggggcaaaacctgtccggtcccagtcgagat
cgagaataccagccgagagaacgaagggatggcagcgaggatccaccaggccctctcatt
cagaaaacccccatcattcttgccaaacctccaggagaaagggctaagccttcccagaat
gcgcctgtcagtggagctccggtcctggataagcccatcatgctcatgaaagccagagat
gacgcagggaagccagggactcctccagaggcagcagctcagtcttctggtcctggaccc
tccaagatggagagggaagggcagcgtcctactcagcccgtataccagattcagaataga
ggaatgggtgcttctgcatcaagtagtgctgtggatcccatggtcggccagtccaaactc
cttcctccagagaaaatgaagcacagcatcaagctagtggatgatcagatgaattggtgc
gacagtgccatggagtatttgagggaccagacggacatgttggtggtgggagtcatcggc
ctgcaggggaccgggaaatctacgatcatgtcgctgttgtctgccaacacgtctgaggag
gatcaaaggagttatgtattcagagcacagacgcaagaaatcaaggaaagaggaggaaac
cagagcacaggcattgatttcttcatcacacaggagagagtcatcttcttagacacacag
ccaatgctcagcccttctatcctggaccatcttattaacaatgatcggaagttgcctcca
gagtacaaccttcctcatacatacgttgagatgcagtcccttcagatcgccgccttcctg
ttcacagtgtgccatgtagtgatagtggttcaagactggttcaccgacctaaacctttac
aggttccttcagactgctgagatgctgaaaccgtccactccgtcagcaagccacgacagc
accggctcttcaggcagcgacgatggagccgaatattatcctcatatagtgttcctccag
aataaggccagacgagatgatttctgtccaagaaatctgaagaacatgcatatggtggtg
gacaagctaatggctcattctcatctcaaatacaaaggtacattgtccatgctagactgc
aatatcttcccaggcctggggcaggactatctggcacccgaggtcaacatgttcttgctc
ccagcgcaggagaacgatggggaggataatctgactaaagcaggctcaggaacgtacccc
ctcttctctctgctgcctggctacagaggacacccttctttctccaccatggtctcaaaa
ctccgcagccaaatactggccatgccccgctgtcagctgtcacacaccattctcactgag
aaaaactggtttcactacgcagctcgtatctgggacggggtgaaaaagtcctcagccctc
tccgaatacagccgcctgctctgctaa
DBGET
integrated database retrieval system
