Amphiprion ocellaris (clown anemonefish): 111577272
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Entry
111577272 CDS
T06018
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111577272 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111577272 (polb)
Enzymes [BR:
aoce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111577272 (polb)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
111577272 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
111577272 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
111577272
NCBI-ProteinID:
XP_023139211
Ensembl:
ENSAOCG00000003197
LinkDB
All DBs
Position
6:complement(32265025..32270356)
Genome browser
AA seq
336 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTIAKYPNKIKSGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMEQMETLILGELEKIDTDYIGTICGS
YRRGAASSGDIDILLTHPNYTSQTEKQPKLLHAVVDHLESIGFVTDTLSKGDTKFMGVCQ
LQQSDEDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PLGVTGVAGEPLLVDSERDIFEYIHYKYREPKDRSE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagcgccgcaggaatctctaaatgagggaataacagactttcttgtc
gagctggccaactacgagaaaaatgtcaacagggcaatacacaagtacaatgcatacagg
aaagcagcgtctaccattgccaagtaccctaacaagatcaaaagtggggaagaggcgaag
aaactggatggtgttggagctaaaatagcagaaaagattgatgaattcctgcaaaccggg
aaactaaggaaactggagaagattcgaaatgatgacactagctcttccatcaatttcctc
accagagttactggaataggtcctgctgctgccaggaagttttttgacgaaggcgtgaag
accttagaagatttgaaaaagatcgagcacaagcttaaccatcatcagcagattggactc
aagtactttgaagaatttgaaaaaaggattccaagagctgaaatggaacagatggagact
ctgattcttggagagttggagaaaatcgatacagactatattggaacaatctgtggaagc
tacaggagaggtgcagcatcgagtggtgatattgatattttgctgacccacccaaactac
acctctcaaactgagaaacaacccaagctgctccatgccgtggtcgaccatttggagtcc
attgggtttgtgaccgacacactgtctaaaggagacactaagttcatgggagtttgtcag
ctgcagcagagcgatgaagatgaggaagaatacctccacaggcgtattgatattaggtta
attcccaaggaccagtactactgtggagttctgtatttcactggaagtgatatcttcaat
aaaaatatgagaactcatgccctggagaagggcttcacactgaatgagtacaccatacga
ccacttggagtcactggtgtggcaggggagcctctgttggtggatagtgagagagacatc
tttgagtacatccattacaaatacagagagccgaaggatcgcagcgagtga
DBGET
integrated database retrieval system
