Amphiprion ocellaris (clown anemonefish): 111577450
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Entry
111577450 CDS
T06018
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
111577450 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoce03036
]
111577450 (ercc6)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111577450 (ercc6)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
111577450 (ercc6)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
111577450 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
TFIIF_beta
HDA2-3
Motif
Other DBs
NCBI-GeneID:
111577450
NCBI-ProteinID:
XP_023139505
Ensembl:
ENSAOCG00000016873
LinkDB
All DBs
Position
16:complement(12149196..12164559)
Genome browser
AA seq
1450 aa
AA seq
DB search
MPVEGTEDQVPSSLSSPASAALTPGGTEEDGATRGSAVCTFPENGQGSEAAAAYPANTGP
GESNSAGKRSGALLQIDRQRIQAASASSGAVELQGLGVAVYDQDVLEQGVLQQVDEAIQE
ASQAAAKVEAEKEYQSVLDDVRSVTASLKHITKIIEQLSPYAASSKDISRKIESVKRQKE
NKEKQLKKVKAKQKRLQAILGGEDAQRVEAELLAEDDGEEEAGPSTLGSMLMPAQETEWE
ELIRKGHMTPFGTRIPQKEVKKEPRKLMLAENSAFDQYLADQAKLATERKKVPLLKKKKS
SGVSPNDGQTKRTGSSSKDKKLKKRMRKLQITALKAHPKARPKAEPHLPKPRKKHHPEGE
ETDSEGSEYLPSDELIDPEQEEREAMEEGFGEDDDEEYELKPYQRKAEGRERKKVKRKDS
EEEYCPESSDEDEDDNGKAKRVKDDGDVEYYRQRIRKWKRQRLREREEKRERGEELTDDS
DAEFDEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVISFLAGL
SYSKLRTRGSNYRYVGLGPTVIVCPATVMHQWVKEFHTWWPLFRVAVLHETGSFTSNKEK
LIPEIASCHGILITSYSAVRNMQDTLQRYDWHYIILDEGHKIRNPNAGVTTACKQFRTPH
RFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAFK
CACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQSFLDSKEVYQIL
NGDMQVFSGLIALRKICNHPDLFSGGPRILRGIPEDQLTEEEHFGFWKRSGKLIVVESLL
RLWFKQGHRVLLFTQSRQMLHILEVFVRENDYSYLKMDGTTTIASRQPLIARYNEDKSIF
IFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYRLLTAGTI
EEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLADLDGAQGTETSAIFAGTGSD
VKAPKKPDRPKPSHTVNYGSHAHKHPSENLNEASADNRHSSTDIPARDGNTSPCSKTFQG
KSNVPRDSENTEQNGVDIVPNISANIQYNNNSRNWDAAKPAHKNSNSLSYHQPRDKDSAL
TSPQKHREKRKHCDPADLDKRKRKKHKHSRDARFEGHRISHLVKRRTYKKADSEDNAPED
QKKSDDYVLAKLFKKSGIHSVMQHDTIMESSNPDYVLVEAEANRVAKDALKALKVSRQKC
RLPFNTPPPPPARKRFGQKKNSLLIGPSVQSAPTPSKCKDATIVKQSLSKKPGSGAHFSG
QAGDSDSNSAPLSSSSLLAKMKARNHLNIPSRQRDEEEEEEEENSAAAPGTSLPPAPPTE
HDELLVDLRNFVAFQANVDGQATTQEVLEYFKPRLTQEQAPVFRELLRSICDFHRTSGQE
GMWKLKEHFR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagaaggtacagaggaccaggtaccctcctctctttccagcccggctagtgct
gccctaacgccgggagggacggaggaggatggagctacaaggggctcagcggtctgcact
ttccctgaaaacggtcagggctccgaggctgctgcagcttatcctgccaacactggacct
ggggagagcaacagtgctggcaagaggtccggagccttgctgcagattgaccgacagcgc
attcaagcagcatctgccagctctggagcggttgaactgcagggccttggtgtggctgtg
tatgaccaggatgtcctcgagcaaggggttctgcagcaagtggatgaggcaatccaggag
gccagtcaggctgcagctaaagttgaagctgagaaggagtaccaatctgtgctggatgat
gtcaggtctgttacagcgtctctaaaacatatcaccaagatcatcgagcagctgtctccc
tatgcagcctccagcaaagacatcagcaggaagattgagtctgtcaaacgacagaaagaa
aataaggagaaacagttgaagaaagtcaaagccaaacagaagcgacttcaggccattctg
ggaggagaggatgctcagagggtggaagctgagctgttggcagaggatgatggagaagaa
gaagctggaccgtccacactgggcagcatgctcatgccagctcaggagactgaatgggag
gagcttatacggaaaggtcacatgactccttttggaacccgaatcccgcagaaagaagta
aagaaagagccccggaaattgatgcttgctgagaactctgcctttgaccagtatttggcg
gaccaagcaaaactggcaactgagaggaagaaagtccctcttctaaagaaaaagaaaagc
tctggagtgagtcctaatgacgggcaaaccaaaagaactggatcctcgtccaaggataaa
aaactgaagaagcgcatgcgaaagctgcagataaccgctttgaaggctcatcctaaggct
cgacccaaggctgagccacacctcccaaagccaaggaagaagcatcaccctgaaggagag
gagacagacagcgaggggtcagagtacctgcccagtgatgaattaatagatcctgagcaa
gaggagagagaagccatggaagagggctttggggaggatgatgatgaagagtatgagttg
aaaccatatcaaagaaaagctgaagggagagagcgaaagaaagttaagaggaaagacagt
gaggaagaatattgccctgagagttcagatgaagatgaggatgacaacggtaaagccaaa
agagtcaaagatgatggcgacgtagagtactacaggcaaagaataaggaaatggaagcgg
cagcggcttcgagaaagggaggagaagagagaaagaggtgaggagcttacagatgacagt
gatgcagaatttgacgaaggcttcaaagttcctggttttctctggaaaaagctttacaag
taccagcagacaggtgtgcggtggatgtgggaactccactgtcagcaggcaggcggcatc
ctgggagatgagatgggattgggtaaaaccatccaggtcatcagctttctggccggactg
agctacagcaagctgagaactagagggtccaactacaggtatgttggactgggtccaaca
gtcattgtgtgcccagctacagtcatgcatcaatgggtgaaggagtttcacacctggtgg
ccacttttcagagtggcagttctacatgaaactggttccttcactagcaacaaggaaaaa
ttgattccagaaatagcatcgtgtcatggtatcctgatcacctcttactcagctgtgagg
aatatgcaggacaccctacagcgctacgactggcactacattatactggatgagggccat
aagatcagaaatccaaatgctggagttaccactgcctgcaagcagtttcgcactcctcac
aggttcatcctgtcaggctcacctatgcagaacaatttgaaggagttgtggtctctgttt
gacttcgtcttccctggcaaactggggacgttgcctgtcttcatggagcagttctctgtg
ccgattaccatgggaggatacagcaatgcctcacctgtgcaggtccagacagctttcaag
tgtgcgtgtgtgctgagggacaccataaatccttacctgctcagaagaatgaaggcagat
gtcaaggccaacctctccttacctgacaaaaatgaacaggtcctgttttgtagattgaca
gaagaccagcggcaggtgtatcagagcttcttagattccaaagaagtttaccaaatacta
aatggggacatgcaggtattctcaggtttgatagcactccgtaagatctgtaaccaccca
gaccttttctccggtgggccccggatactgaggggaatcccagaggaccagctaactgaa
gaggaacactttggcttctggaaacgctctggcaagctgatagtggtggagtcactgcta
cgtctctggttcaaacagggccacagggtcctgctcttcactcagtctagacagatgctg
cacatcttggaggtgtttgtaagggagaatgactactcatatctgaaaatggatggcacg
accacaatagcttctcgacagccgctcatcgctcgctacaacgaggacaaatccattttt
atcttcttgttgaccactaaagttggaggtctgggagtcaatctgactggagccaacaga
gtcatcatttatgacccagactggaaccccagtaccgacacacaggcacgggaacgagca
tggaggatcggtcagaagcagcaagtaacaatctacaggctgctgactgcagggaccatc
gaagagaaaatctaccacaggcaaatcttcaaacagtttctcaccaatcgtgttctgaag
gatcccaaacaaagacggttcttcaagtctaatgacatctatgagctcttcactctagct
gaccttgatggagcccaggggactgagaccagtgccatatttgcaggtacgggctctgat
gtcaaagcgcccaagaaacccgatagaccaaagccatcacacactgtaaactatggcagc
catgcgcataaacacccctcagaaaacttgaatgaagcaagcgcagacaacaggcactcc
tcgacagatattccagcaagagatggaaacacctctccatgcagtaaaacctttcagggt
aagtcaaatgttccgagggacagtgaaaacaccgagcaaaatggtgtggatatagtgcca
aatatttcagcaaatatacagtataataataacagcaggaactgggatgcagccaagcca
gcacacaaaaattctaactcgctcagctatcaccaacccagggacaaagactctgccctg
actagtccacagaaacacagagaaaagagaaagcactgtgatccagctgacttggataaa
cgtaaacggaagaaacacaaacactcccgagatgctcggtttgagggccaccgcatctcc
catttggtgaagaggaggacatataagaaggcagacagcgaagacaatgcgccagaggac
cagaagaaatctgacgattacgtcttggcaaagcttttcaagaagtctggtatccacagt
gtgatgcagcatgacactatcatggagtcatccaatcctgattatgttcttgtggaggca
gaagccaacagggtggctaaagacgcccttaaagctctaaaggtttctcggcagaagtgc
agacttcctttcaatacacctcctccaccacctgcaaggaaacgttttggacaaaagaag
aattctctcttaattggaccttctgttcagtctgcccccactccgagcaaatgcaaggat
gctacgattgtaaagcagtctctgtcaaagaaacctggctcaggagctcatttcagtgga
caggccggagatagcgactcaaactccgccccattgtcctcctcctctttgctggccaag
atgaaagctcgtaatcacctcaacataccctccagacagagagacgaagaagaagaagag
gaggaggagaatagcgccgcagctccaggaacgagcctccctcctgctccacccactgag
cacgacgagctgttggtggatctgcgcaacttcgtggccttccaggcaaatgtggacgga
caggccaccacccaggaagtactggagtacttcaaaccaagactgacccaggagcaggcg
cctgtctttagagagctacttaggagcatctgtgactttcataggacctctggtcaggag
ggcatgtggaaactgaaggagcactttcgctga
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integrated database retrieval system
