Amphiprion ocellaris (clown anemonefish): 111577882
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Entry
111577882 CDS
T06018
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03082
ATP-dependent chromatin remodeling
aoce03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111577882
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111577882
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aoce01009
]
111577882
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111577882
03036 Chromosome and associated proteins [BR:
aoce03036
]
111577882
Protein phosphatases and associated proteins [BR:
aoce01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111577882
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111577882
SWI/SNF complex
111577882
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111577882
PBAF complex
111577882
SWI/SNF complex
111577882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
111577882
NCBI-ProteinID:
XP_023140136
Ensembl:
ENSAOCG00000008992
UniProt:
A0AAQ5YQ44
LinkDB
All DBs
Position
17:complement(23907281..23918815)
Genome browser
AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQIEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggctttaagtaaaacatttggccagaagccagtcaaatttcagctagaacaa
gatggggacttttacatggtggggtcggaggttggaaactatctgcggatgttcagaggc
tctctctataagagatacccatctttatggaggaggctggcctctgtggaggaaaggaag
aaaattgtagcttcatcacatgctaccagtgttactttgctgaaggcttcagaatgtgaa
gagatctttgagggtaatgatgagaaatacaaggcggtgtccatcagcacagagccccca
gcctacctcagggagcaaaaagcaaagaggagcagtcagtgggtccccacactgcccaac
agctctcaccatctagatgctgtgccttgttcaaccaccatcaaccgtaaccgaatgggc
cgtgacaagaagaggaccttccccctgtgctttgatgaccacgaccctgcagtcatccat
gagaacgcagcacagatagaggcactggttcccattcgtctagacatggagatagacggg
cagaaactacgagatgccttcacatggaacatgaatgagaaactgatgaccccagagatg
tttgcggagattttgtgtgatgacctggacctaaatcctctggccttcgtcccagctatt
gcctcggctattcgtcagcagattgagtcctaccccactgacagcatactcgaagagcag
gcagaccagagagtaatcatcaagctgaatatccacgtgggtaacatctctctggtagac
cagtttgagtgggacatgtcagagagagagaactctccagagtcatttgcactgaagctg
tgttctgagctgggcctaggcggagagtttgtcaccactattgcctacagcattcgaggt
cagctcagctggcaccagaggacctacgccttcagtgagaacccactccccacagtagag
attgccatccgcaacacaggcgatgcagaccagtggtgccctctgctggagaccctcaca
gatgccgaaatggagaagaagatccgagaccaagacaggaacacgaggcgcatgagacga
ttggccaacaccgccccttcctggtag
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