Amphiprion ocellaris (clown anemonefish): 111577896
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Entry
111577896 CDS
T06018
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111577896 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111577896 (msh2)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111577896 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
111577896
NCBI-ProteinID:
XP_023140173
Ensembl:
ENSAOCG00000021411
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MAVQPKQNLSMDSAAEHGFLNFISSMPEKPDTTFRIFDRSDYYTVHGKDAVFAAKEVFKT
SGVIKYLGSGSRKLESVILSKLNFEAFVKDLLLVRQYRVEVYKNHSKSSKEHDWKIEYKA
SPGNLTQFEEILFGGASGAEGCAGVVAVRFATGADGQRVVGVGYVDAAQRKMGVCEFPDN
EIFSNLESLLVQITPKECLLAQGDGNTDGSKLREVVQRGGMLVSDRKRAEFSSKDMVQDL
NRLLRAKKGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTSLDLGQYMR
LDNAAVRALNLFQGSPDDTSRAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
LVESFVCDSELRQTCQEDLLRRFPDLQRMAKKFHRHSATLQDCYRVYQAVSQIPALITAL
ERYSGSYQVLLQAVFLSPLTDLLTDFTKYQEMIETTLDMNQIDHHEFLVKASFDPVLSEL
REKMDGLEKSMQATLNSAARELGLDAGKTIKLESNAMLGFYLRVTCKEEKSLRNNKKFTM
LDVQKNGVRFTNSKLSSLNEEYTKNREEYEEAQNAIVKEIINIASGYVDPLQTLSDVIAQ
MDAVASFAVASVSAPVPFVRPRLLADGCRRMELLQARHPCMETDADTAFIPNDITFVQGE
KNFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSTTDSILARVGAGDSQVKG
VSTFMSEMLETAAILRSATKNSLIIIDELGRGTSTYDGFGLAWAISEHIASKISCFCLFA
THFHELTALAAQQTTVHNLHVTALTSHDTLTMLYRVKPGVCDQSFGIHVAELASFPPSVL
AMAKEKAQELEEFQEPTGEKSEQEEEPEAKRRRTDKQVGENLIQDFLQKVKSLPAATMTD
DEVKVELRKMKQELMARNNTYISEILARCVPVKTA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcagccgaagcagaacctgtccatggacagtgcagccgagcatggcttcctg
aacttcatctcctccatgccggagaagccggacaccacgttccggatatttgaccggagc
gactactacaccgtccacgggaaagacgccgtattcgcggcgaaggaggttttcaagacg
agcggcgtcatcaaatacctgggctcagggagtcgcaagctggagagtgtgatcctgagc
aagctcaactttgaggccttcgtgaaggacttgctgctggtgaggcagtacagagtggag
gtgtacaagaaccacagcaagagcagcaaggagcacgactggaagatcgagtacaaggcc
tctcctggaaacttgactcagtttgaggagatcctgtttggcggtgcgtctggagctgag
ggatgcgcaggagttgtagccgtgcgtttcgctacaggagctgatggacagcgtgtggtc
ggggtcggctacgtggacgcagcccagagaaagatgggagtctgcgagttcccagacaac
gagatcttctccaacctggagtccctgctcgtccagatcacccccaaagagtgtctctta
gctcagggtgacggcaacactgatgggagcaaactacgggaggtggtgcagcgtggcggc
atgttggtctctgacagaaagagagcagagttcagcagcaaggacatggtccaggatctc
aacaggctgctgagggccaagaaaggagagactgtggcgagcaacaccctgccggagctg
gacaaacaggtagcgatgtcctgtttggctgcagtggttcgtttccttgagctgctttct
gacgagtccaacttcaactccttcagtctgacctctctggacctgggtcagtacatgagg
ctggacaatgctgccgtcagagctctgaacctcttccagggttcacctgatgacaccagc
agagctcattcattggccggtctgctgaacaagtgtcgaacgccgcagggccaacggctg
gtcaaccagtggatcaaacagccactcatggacaaaaccaaaatagaggagaggctggac
ctggtggagagctttgtgtgcgactccgagctgaggcagacctgtcaggaggatttgctg
cggcggtttcctgatcttcagcgcatggccaagaagtttcaccgtcacagtgcgacgctg
caggactgttaccgtgtctaccaggctgttagccagatcccagccctcatcacggctctg
gagagatactcaggaagctaccaggttttgctgcaggcagtgttcctctcccctctcaca
gacctgctgactgacttcaccaagtaccaggagatgattgaaaccacgctggacatgaac
cagattgaccaccatgagttcctggtgaaggcgtcgtttgatccggtgttgagcgagctg
agagaaaagatggatggactggagaagagcatgcaggcgacgctgaacagcgcagccaga
gaactaggtctggatgccggtaagacgataaagctggagtccaacgccatgctgggtttt
tacctgagagtcacatgcaaggaggagaagagtctgaggaacaacaagaagttcaccatg
ctggatgtccagaagaacggagtgcgtttcactaacagtaagctgagctccctgaacgag
gagtacaccaagaaccgggaggaatacgaggaggcccagaacgccatcgtcaaagagatc
atcaacatcgcctcaggttacgtggatcccctccagacgctgagcgatgtcatagcgcag
atggatgccgtggccagtttcgccgtggcgtccgtctccgctccggtgccgttcgtccgg
cctcgcctcttggccgacggctgcaggcgcatggagctgctgcaggccagacatccctgc
atggagacggacgcagacaccgctttcatccccaacgacatcaccttcgtccagggcgag
aagaacttctacatcataacaggaccaaacatgggcggcaagtcgacgttcatccggcag
gtgggcgtgatcgctctgatggctcagatcggctgctttgtgccatgtgagaaggcggag
cttagcacgactgacagcatcctggcccgagtgggagcaggagacagccaggtgaaggga
gtgtccacgtttatgtccgagatgctggagacggccgccattctgcgctcggccacaaag
aactccctcatcatcatcgacgagctcggcagaggcacgtccacctacgacggcttcggt
ctggcctgggccatcagcgagcacatcgcctccaaaatcagctgcttctgcctctttgcc
actcacttccatgagctgacagcgctggcagcacagcagaccaccgtccacaacctgcac
gtcacggcgctgacgtcccacgacacgctcacgatgctgtacagagtcaaaccaggtgtc
tgtgaccagagttttggaatccatgttgccgagttggcttccttcccgccgtcagtactg
gccatggcgaaggagaaggcccaggagctggaggagttccaggaacctacgggggagaag
tcggagcaggaggaagagcccgaggccaaaagacgcaggacagacaaacaagtgggagaa
aacctgatccaggacttcctgcagaaggtaaaatcgcttcctgctgccaccatgaccgac
gacgaggtgaaggtggagctcaggaaaatgaagcaggagctgatggccagaaataacacg
tacatcagtgagatcctagcacgctgcgttcctgtaaaaactgcttga
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